RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 SAA2-SAA4A0A096LPE2 208 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 LOC389332A0A1B0GUA5 103 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 GAGE12BA1L429 117 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 DNAJC9-AS1A6NH13 148 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 TMEM14DPA8MWL7 114 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 GAGE7O76087 117 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 GAGE12FP0CL80 117 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 GAGE12GP0CL81 117 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 GAGE12IP0CL82 117 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 SAA2P0DJI9 122 aaPredicted RBP3.69□□□□□ -1.82
LRRK2-204ENST00000430804 VSIG8P0DPA2 414 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 CD28P10747 220 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 AZU1P20160 251 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 C5orf24Q7Z6I8 188 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 Q8TCH9 128 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 TNFRSF12AQ9NP84 129 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 OTORQ9NRC9 128 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 FRRS1LQ9P0K9 344 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 A0A087WWC5 75 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 RHOHQ15669 191 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 TMEM170BQ5T4T1 132 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 WIPF2Q8TF74 440 aaPredicted RBP3.69□□□□□ -1.82
LRRK2-204ENST00000430804 LINC00479Q96M42 142 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 NABP2Q9BQ15 211 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 U3KQK5 164 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 POLR2AP24928 1970 aaKnown RBP3.69□□□□□ -1.82
LRRK2-204ENST00000430804 CRYBA2P53672 197 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 TCL1AP56279 114 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 KLF5Q13887 457 aaPredicted RBP3.69□□□□□ -1.82
LRRK2-204ENST00000430804 INSL4Q14641 139 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 ZFAND6Q6FIF0 208 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 ZNF562Q6V9R5 426 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 LRP11Q86VZ4 500 aa3.69□□□□□ -1.82
LRRK2-204ENST00000430804 IGHV3OR16-8A0A075B7F1 116 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 CD55P08174 381 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 FCN2Q15485 313 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 SLC25A48Q6ZT89 311 aaKnown RBP3.68□□□□□ -1.82
LRRK2-204ENST00000430804 GTF2H5Q6ZYL4 71 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 WFDC11Q8NEX6 87 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 UBE2AP49459 152 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 TIAL1Q01085 375 aaKnown RBP eCLIP3.68□□□□□ -1.82
LRRK2-204ENST00000430804 TNFRSF9Q07011 255 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 PNRC1Q12796 327 aaPredicted RBP3.68□□□□□ -1.82
LRRK2-204ENST00000430804 PSG3Q16557 428 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 OR52E5Q8NH55 327 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 FMC1Q96HJ9 113 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 RCC2Q9P258 522 aaKnown RBP3.68□□□□□ -1.82
LRRK2-204ENST00000430804 VAX2Q9UIW0 290 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 COL4A5P29400 1685 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 TRAV10A0A0B4J240 114 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 SRRM4A7MD48 611 aaKnown RBP3.68□□□□□ -1.82
LRRK2-204ENST00000430804 SPINK4O60575 86 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 CD74P04233 296 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 DUX4L9Q6RFH8 374 aaPredicted RBP3.68□□□□□ -1.82
LRRK2-204ENST00000430804 IGFL2Q6UWQ7 119 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 Q8NA96 180 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 SCN10AQ9Y5Y9 1956 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 A8MWV9 139 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 CDC42EP2O14613 210 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 CIDEAO60543 219 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 RCC1P18754 421 aaPredicted RBP3.68□□□□□ -1.82
LRRK2-204ENST00000430804 FXYD7P58549 80 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 RPL24P83731 157 aaKnown RBP3.68□□□□□ -1.82
LRRK2-204ENST00000430804 FBXL19-AS1Q494R0 122 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 MORN2Q502X0 79 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 RNF152Q8N8N0 203 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 NRTNQ99748 197 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 TMEM222Q9H0R3 208 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 C9orf170A2RU37 121 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 PEX7O00628 323 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 LINC00303Q3SY05 128 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 IGSF11Q5DX21 431 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 GGNQ86UU5 652 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 C16orf74Q96GX8 76 aa3.68□□□□□ -1.82
LRRK2-204ENST00000430804 CACNA1EQ15878 2313 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 DLG5Q8TDM6 1919 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 A0A0G2JK05 382 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 FAM90A9PA6NNJ1 464 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 SIX6O95475 246 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 FABP5Q01469 135 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 PPP1R1CQ8WVI7 109 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 HIVEP2P31629 2446 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 COL24A1Q17RW2 1714 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 A0A1B0GWJ7 208 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 DEFA6Q01524 100 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 MRPL54Q6P161 138 aaKnown RBP3.67□□□□□ -1.82
LRRK2-204ENST00000430804 LINC00482Q8N8I6 264 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 FER1L6-AS1Q8NA97 138 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 GAFA1Q96PS6 74 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 TBX15Q96SF7 602 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 ATP6V0BQ99437 205 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 COL11A2P13942 1736 aaPredicted RBP3.67□□□□□ -1.82
LRRK2-204ENST00000430804 ARID1BQ8NFD5 2236 aaPredicted RBP3.67□□□□□ -1.82
LRRK2-204ENST00000430804 TRAV12-3A0A0B4J271 114 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 F2Z2F3 143 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 ANGP03950 147 aaKnown RBP3.67□□□□□ -1.82
LRRK2-204ENST00000430804 LINC00271P0C7V0 271 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 ZNF324BQ6AW86 544 aaPredicted RBP3.67□□□□□ -1.82
LRRK2-204ENST00000430804 SPSB4Q96A44 273 aa3.67□□□□□ -1.82
LRRK2-204ENST00000430804 MBD6Q96DN6 1003 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms