RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 SS18Q15532 418 aa13.83□□□□□ -0.2
RIF1-204ENST00000430328 RPL36ALQ969Q0 106 aaKnown RBP13.83□□□□□ -0.2
RIF1-204ENST00000430328 TIMM21Q9BVV7 248 aa13.83□□□□□ -0.2
RIF1-204ENST00000430328 PTPRDP23468 1912 aa13.83□□□□□ -0.2
RIF1-204ENST00000430328 B9A039 149 aa13.83□□□□□ -0.2
RIF1-204ENST00000430328 CD5P06127 495 aa13.83□□□□□ -0.2
RIF1-204ENST00000430328 TMEM144Q7Z5S9 345 aa13.83□□□□□ -0.2
RIF1-204ENST00000430328 PVRIGQ6DKI7 326 aa13.83□□□□□ -0.2
RIF1-204ENST00000430328 hDV102S1A0JD36 115 aa13.83□□□□□ -0.2
RIF1-204ENST00000430328 C9orf50Q5SZB4 431 aa13.83□□□□□ -0.2
RIF1-204ENST00000430328 OR13A1Q8NGR1 328 aa13.83□□□□□ -0.2
RIF1-204ENST00000430328 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.83□□□□□ -0.2
RIF1-204ENST00000430328 C1QAP02745 245 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 SLC25A47Q6Q0C1 308 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.82□□□□□ -0.2
RIF1-204ENST00000430328 VCYO14598 125 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 TRAV25A0A0B4J276 109 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 CCL4P13236 92 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 CEACAM1P13688 526 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 ZNF876PQ49A33 203 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 ZNF721Q8TF20 911 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 NABP1Q96AH0 204 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 FAM219BQ5XKK7 198 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 ZAR1Q86SH2 424 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 BAALCQ8WXS3 180 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 YBX2Q9Y2T7 364 aaKnown RBP13.82□□□□□ -0.2
RIF1-204ENST00000430328 BHLHA9Q7RTU4 235 aa13.82□□□□□ -0.2
RIF1-204ENST00000430328 SLC25A48Q6ZT89 311 aaKnown RBP13.81□□□□□ -0.2
RIF1-204ENST00000430328 NCKAP5O14513 1909 aa13.81□□□□□ -0.2
RIF1-204ENST00000430328 TRBV5-7A0A0A0MS05 114 aa13.81□□□□□ -0.2
RIF1-204ENST00000430328 TRAV12-1A0A0B4J245 112 aa13.81□□□□□ -0.2
RIF1-204ENST00000430328 D6R8Y8 96 aa13.81□□□□□ -0.2
RIF1-204ENST00000430328 HIST3H2BBQ8N257 126 aa13.81□□□□□ -0.2
RIF1-204ENST00000430328 COL11A1P12107 1806 aaPredicted RBP13.81□□□□□ -0.2
RIF1-204ENST00000430328 MPV17L2Q567V2 206 aa13.81□□□□□ -0.2
RIF1-204ENST00000430328 PPDPFLQ8WWR9 84 aa13.81□□□□□ -0.2
RIF1-204ENST00000430328 DUSP15Q9H1R2 295 aaPredicted RBP13.81□□□□□ -0.2
RIF1-204ENST00000430328 CRIM1Q9NZV1 1036 aa13.81□□□□□ -0.2
RIF1-204ENST00000430328 VDAC2P45880 294 aaPredicted RBP13.81□□□□□ -0.2
RIF1-204ENST00000430328 PRB3Q04118 309 aaPredicted RBP13.81□□□□□ -0.2
RIF1-204ENST00000430328 DMRTC2Q8IXT2 367 aaPredicted RBP13.81□□□□□ -0.2
RIF1-204ENST00000430328 MED13LQ71F56 2210 aa13.81□□□□□ -0.2
RIF1-204ENST00000430328 A0A1W2PPI3 338 aa13.81□□□□□ -0.2
RIF1-204ENST00000430328 RNF125Q96EQ8 232 aa13.81□□□□□ -0.2
RIF1-204ENST00000430328 LINC01565O15544 149 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 RCHY1Q96PM5 261 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 AMBPP02760 352 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 ZIC4Q8N9L1 334 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 LHFPL6Q9Y693 200 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 TMEM190Q8WZ59 177 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 TRAV13-1A0A0B4J241 112 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 OVOL1O14753 267 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 EFEMP2O95967 443 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 OCC1Q8TAD7 63 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 KCNK17Q96T54 332 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 TMEM242Q9NWH2 141 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 LAMB2P55268 1798 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 SMAD7O15105 426 aaKnown RBP13.8□□□□□ -0.2
RIF1-204ENST00000430328 SRD5A1P18405 259 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 ATRAIDQ6UW56 229 aa13.8□□□□□ -0.2
RIF1-204ENST00000430328 IGHG4P01861 327 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 RREB1Q92766 1687 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 NEGR1Q7Z3B1 354 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 LRP6O75581 1613 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 GATA2P23769 480 aaPredicted RBP13.79□□□□□ -0.2
RIF1-204ENST00000430328 TCRBV4S1A1TA0A5B7 111 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 IL18BPO95998 194 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 COX5BP10606 129 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 WNK1Q9H4A3 2382 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 CD160O95971 181 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 F8W1H4 67 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 NBL1P41271 181 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 SIGLEC15Q6ZMC9 328 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 IMMP1LQ96LU5 166 aa13.79□□□□□ -0.2
RIF1-204ENST00000430328 UCP1P25874 307 aa13.78□□□□□ -0.2
RIF1-204ENST00000430328 CMC4P56277 68 aaPredicted RBP13.78□□□□□ -0.2
RIF1-204ENST00000430328 LSM4Q9Y4Z0 139 aaKnown RBP13.78□□□□□ -0.2
RIF1-204ENST00000430328 NGFRP08138 427 aa13.78□□□□□ -0.2
RIF1-204ENST00000430328 C1QL4Q86Z23 238 aa13.78□□□□□ -0.2
RIF1-204ENST00000430328 ACP7Q6ZNF0 438 aa13.78□□□□□ -0.2
RIF1-204ENST00000430328 LOC102723996A0A087X1L8 192 aa13.78□□□□□ -0.2
RIF1-204ENST00000430328 APOBEC3AP31941 199 aaPredicted RBP13.78□□□□□ -0.2
RIF1-204ENST00000430328 C1orf159Q96HA4 380 aa13.78□□□□□ -0.2
RIF1-204ENST00000430328 IGHV3-11P01762 117 aa13.77□□□□□ -0.2
RIF1-204ENST00000430328 LIMS1P48059 325 aa13.77□□□□□ -0.2
RIF1-204ENST00000430328 UPK2O00526 184 aa13.77□□□□□ -0.2
RIF1-204ENST00000430328 CRYBA2P53672 197 aa13.77□□□□□ -0.2
RIF1-204ENST00000430328 TCF15Q12870 199 aa13.77□□□□□ -0.2
RIF1-204ENST00000430328 NKAPP1Q8N9T2 125 aa13.77□□□□□ -0.2
RIF1-204ENST00000430328 SPXQ9BT56 116 aa13.77□□□□□ -0.2
RIF1-204ENST00000430328 TSSC4Q9Y5U2 329 aaPredicted RBP13.77□□□□□ -0.2
RIF1-204ENST00000430328 ANKRD29Q8N6D5 301 aa13.77□□□□□ -0.2
RIF1-204ENST00000430328 ZNF525Q8N782 197 aa13.77□□□□□ -0.21
RIF1-204ENST00000430328 IGHV3-73A0A0B4J1V6 119 aa13.77□□□□□ -0.21
RIF1-204ENST00000430328 SYS1-DBNDD2H3BUS1 97 aa13.77□□□□□ -0.21
RIF1-204ENST00000430328 PCNX1Q96RV3 2341 aa13.77□□□□□ -0.21
RIF1-204ENST00000430328 ARHGAP32A7KAX9 2087 aa13.77□□□□□ -0.21
RIF1-204ENST00000430328 TIMP3P35625 211 aa13.77□□□□□ -0.21
RIF1-204ENST00000430328 LTBRP36941 435 aa13.77□□□□□ -0.21
RIF1-204ENST00000430328 ZNF474Q6S9Z5 364 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms