RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 Q56UQ5 140 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 SLC16A13Q7RTY0 426 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 MCRIP2Q9BUT9 160 aaKnown RBP9.44□□□□□ -0.9
USP40-205ENST00000430158 RNF126Q9BV68 326 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 SIGLEC8Q9NYZ4 499 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 MGAT4CQ9UBM8 478 aa9.44□□□□□ -0.9
USP40-205ENST00000430158 STRAPQ9Y3F4 350 aaKnown RBP9.44□□□□□ -0.9
USP40-205ENST00000430158 IGKV1OR2-108A0A075B7D4 117 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 TMEM213A2RRL7 107 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 SEC14L6B5MCN3 397 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 NDUFA4O00483 81 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 DEDDO75618 318 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 IFNA4P05014 189 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 C8orf88P0DMB2 117 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 KRTAP10-11P60412 298 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 RPP30P78346 268 aaKnown RBP9.43□□□□□ -0.9
USP40-205ENST00000430158 ETFRF1Q6IPR1 90 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 UBAC2Q8NBM4 344 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 TMEM190Q8WZ59 177 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 NPIPB3Q92617 1050 aa9.43□□□□□ -0.9
USP40-205ENST00000430158 LSM5Q9Y4Y9 91 aaKnown RBP9.43□□□□□ -0.9
USP40-205ENST00000430158 PRKDCP78527 4128 aaKnown RBP9.43□□□□□ -0.9
USP40-205ENST00000430158 C2orf70A6NJV1 201 aa9.42□□□□□ -0.9
USP40-205ENST00000430158 GNG7O60262 68 aa9.42□□□□□ -0.9
USP40-205ENST00000430158 RAB11AP62491 216 aa9.42□□□□□ -0.9
USP40-205ENST00000430158 CYCSP99999 105 aaKnown RBP9.42□□□□□ -0.9
USP40-205ENST00000430158 TIGITQ495A1 244 aa9.42□□□□□ -0.9
USP40-205ENST00000430158 FAM106AQ4KMX7 169 aa9.42□□□□□ -0.9
USP40-205ENST00000430158 TM4SF20Q53R12 229 aa9.42□□□□□ -0.9
USP40-205ENST00000430158 C9orf66Q5T8R8 295 aa9.42□□□□□ -0.9
USP40-205ENST00000430158 THAP8Q8NA92 274 aa9.42□□□□□ -0.9
USP40-205ENST00000430158 PPP1R1CQ8WVI7 109 aa9.42□□□□□ -0.9
USP40-205ENST00000430158 LYRM2Q9NU23 88 aaPredicted RBP9.42□□□□□ -0.9
USP40-205ENST00000430158 OR5AC2Q9NZP5 309 aa9.42□□□□□ -0.9
USP40-205ENST00000430158 TRAV30A0A087WSZ9 112 aa9.41□□□□□ -0.9
USP40-205ENST00000430158 IGSF23A1L1A6 192 aa9.41□□□□□ -0.9
USP40-205ENST00000430158 FAM24AA6NFZ4 105 aa9.41□□□□□ -0.9
USP40-205ENST00000430158 K7EMT4 169 aa9.41□□□□□ -0.9
USP40-205ENST00000430158 NUPL2O15504 423 aaKnown RBP9.41□□□□□ -0.9
USP40-205ENST00000430158 MPC2O95563 127 aa9.41□□□□□ -0.9
USP40-205ENST00000430158 IGLV1-51P01701 117 aa9.41□□□□□ -0.9
USP40-205ENST00000430158 METTL15P1P0C7V9 234 aa9.41□□□□□ -0.9
USP40-205ENST00000430158 INSL3P51460 131 aa9.41□□□□□ -0.9
USP40-205ENST00000430158 ELLP55199 621 aaPredicted RBP9.41□□□□□ -0.9
USP40-205ENST00000430158 YPEL3P61236 119 aaPredicted RBP9.41□□□□□ -0.9
USP40-205ENST00000430158 RRAS2P62070 204 aaPredicted RBP9.41□□□□□ -0.9
USP40-205ENST00000430158 TOMM20LQ6UXN7 152 aa9.41□□□□□ -0.9
USP40-205ENST00000430158 OR1S2Q8NGQ3 325 aa9.41□□□□□ -0.9
USP40-205ENST00000430158 MED28Q9H204 178 aa9.41□□□□□ -0.9
USP40-205ENST00000430158 TRAV14DV4A0A0A6YYC5 116 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 SCAF4O95104 1147 aaKnown RBP9.4□□□□□ -0.9
USP40-205ENST00000430158 LYL1P12980 280 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 FOLR2P14207 255 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 CBLN1P23435 193 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 OR10J1P30954 320 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 S100A10P60903 97 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 DLK1P80370 383 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 RELQ04864 619 aaPredicted RBP9.4□□□□□ -0.9
USP40-205ENST00000430158 ZNF600Q6ZNG1 722 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 Q6ZNX1 250 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 ACOT7LQ6ZUV0 252 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 Q8N3U1 123 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 TMEM252Q8N6L7 170 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 ACY3Q96HD9 319 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 ELOVL1Q9BW60 279 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 GPR61Q9BZJ8 451 aa9.4□□□□□ -0.9
USP40-205ENST00000430158 PAIP2BQ9ULR5 123 aaKnown RBP9.4□□□□□ -0.9
USP40-205ENST00000430158 IGHV3OR16-8A0A075B7F1 116 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 KRTAP9-6A0A140TA67 174 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 ZNF320A2RRD8 509 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 FNDC10F2Z333 226 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 L7N2F9 121 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 SAP30O75446 220 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 VAMP2P63027 116 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 DEFB114Q30KQ6 69 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 Q5BKY6 102 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 OR8G2PQ6IF36 304 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 TMEM144Q7Z5S9 345 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 CHAC2Q8WUX2 184 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 SLC35E1Q96K37 410 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 TRGV9Q99603 122 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 PEMTQ9UBM1 199 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 UFC1Q9Y3C8 167 aa9.39□□□□□ -0.91
USP40-205ENST00000430158 LSM4Q9Y4Z0 139 aaKnown RBP9.39□□□□□ -0.91
USP40-205ENST00000430158 PUS1Q9Y606 427 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP40-205ENST00000430158 E5RGE8 158 aa9.38□□□□□ -0.91
USP40-205ENST00000430158 G3V3Q6 166 aa9.38□□□□□ -0.91
USP40-205ENST00000430158 TOMM40O96008 361 aa9.38□□□□□ -0.91
USP40-205ENST00000430158 P2RY1P47900 373 aa9.38□□□□□ -0.91
USP40-205ENST00000430158 SULT1A1P50225 295 aa9.38□□□□□ -0.91
USP40-205ENST00000430158 ZNF90Q03938 601 aa9.38□□□□□ -0.91
USP40-205ENST00000430158 VWC2Q2TAL6 325 aa9.38□□□□□ -0.91
USP40-205ENST00000430158 LRRC37A5PQ49AS3 106 aa9.38□□□□□ -0.91
USP40-205ENST00000430158 TMEM182Q6ZP80 229 aaPredicted RBP9.38□□□□□ -0.91
USP40-205ENST00000430158 GGACTQ9BVM4 153 aa9.38□□□□□ -0.91
USP40-205ENST00000430158 DAZ1Q9NQZ3 744 aaKnown RBP9.38□□□□□ -0.91
USP40-205ENST00000430158 MRPL27Q9P0M9 148 aaKnown RBP9.38□□□□□ -0.91
USP40-205ENST00000430158 MLXQ9UH92 298 aa9.38□□□□□ -0.91
USP40-205ENST00000430158 U3KQE9 123 aa9.38□□□□□ -0.91
USP40-205ENST00000430158 WI2-2373I1.2A0A1W2PRP0 233 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms