RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 FAM240AA0A1B0GVK7 77 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 CXCL13O43927 109 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 ZNF492Q9P255 531 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 RNPS1Q15287 305 aaKnown RBP6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 LGALS9BQ3B8N2 356 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 LGALS9CQ6DKI2 356 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 KCNK17Q96T54 332 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 J3QT63 122 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 LINC01565O15544 149 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 ZNF415Q09FC8 603 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 HIF1ANQ9NWT6 349 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 LGALS1P09382 135 aaKnown RBP6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 GAGE2AQ6NT46 116 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 IGLV1-36A0A0B4J1U3 117 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 FAM106CPP0CH98 169 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 HGFACQ04756 655 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 FAM106AQ4KMX7 169 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 WDR82Q6UXN9 313 aa6.34□□□□□ -1.39
SYNPO2-202ENST00000429713 C10orf128Q5T292 105 aa6.34□□□□□ -1.4
SYNPO2-202ENST00000429713 FAM90A1Q86YD7 464 aa6.34□□□□□ -1.4
SYNPO2-202ENST00000429713 PRDM14Q9GZV8 571 aa6.34□□□□□ -1.4
SYNPO2-202ENST00000429713 ZNF688P0C7X2 276 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 LPAL2Q16609 132 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 C6orf15Q6UXA7 325 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 DNAH14Q0VDD8 3507 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 K7ESF4 209 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 UNC119Q13432 240 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 DMRTC2Q8IXT2 367 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 AMELYQ99218 206 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 PTGDSP41222 190 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 MYF5P13349 255 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 LTBRP36941 435 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 ZXDAP98168 799 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 TMEM92Q6UXU6 159 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 RAXQ9Y2V3 346 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 FABP5P3A8MUU1 101 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 PEX7O00628 323 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 COL9A1P20849 921 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 PRSS12P56730 875 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 RPL15P61313 204 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 RPP25Q9BUL9 199 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 NHP2Q9NX24 153 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 TRAV8-1A0A0A6YYK1 113 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 SMIM10L1P0DMW3 83 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 CXorf67Q86X51 503 aaPredicted RBP6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 SMIM10Q96HG1 83 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 MRPL20Q9BYC9 149 aaKnown RBP6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 PILRAQ9UKJ1 303 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 DLX6P56179 175 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 NUP35Q8NFH5 326 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 CHAC1Q9BUX1 264 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 JPT1Q9UK76 154 aa6.33□□□□□ -1.4
SYNPO2-202ENST00000429713 ETV2O00321 342 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 KIR2DL4Q99706 377 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 TSSC4Q9Y5U2 329 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 TRAV26-1A0A087WT03 109 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 A0A1W2PS18 150 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 TRACP01848 142 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 RASL10BQ96S79 203 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 SPSB2Q99619 263 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 LTBP2Q14767 1821 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 LGALS3P17931 250 aaKnown RBP6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 LYPD1Q8N2G4 141 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 F8P00451 2351 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 M0R2P5 195 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 TNFAIP6P98066 277 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 GUSBP1Q15486 140 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 PRR30Q53SZ7 412 aaPredicted RBP6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 MEIG1Q5JSS6 88 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 LAMA3Q16787 3333 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 C2CD4DB7Z1M9 353 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 F2RL2O00254 374 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 FOXS1O43638 330 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 ADIPOQQ15848 244 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 VKORC1L1Q8N0U8 176 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 TIMD4Q96H15 378 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 DOPEY1Q5JWR5 2465 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 ZNF718Q3SXZ3 478 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 ATP5EP2Q5VTU8 51 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 FBXL15Q9H469 300 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 CCL28Q9NRJ3 127 aa6.32□□□□□ -1.4
SYNPO2-202ENST00000429713 IGHV1OR21-1A0A087WYE8 117 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 LY6DQ14210 128 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 FOXI2Q6ZQN5 318 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 DNAJC30Q96LL9 226 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 COL5A1P20908 1838 aaPredicted RBP6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 DEFB108AA8MXU0 73 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 PRSS57Q6UWY2 283 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 LRRC29Q8WV35 223 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 TMEM230Q96A57 120 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 H3BQ85 93 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 FCGR3BO75015 233 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 PATE4P0C8F1 98 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 CACNG7P62955 275 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 ALKBH6Q3KRA9 238 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 Q6ZVH6 145 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 TMEM256Q8N2U0 113 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 WDR83OSQ9Y284 106 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 hCG_38984A0A1B0GV85 526 aa6.31□□□□□ -1.4
SYNPO2-202ENST00000429713 TMEM229AB2RXF0 380 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms