RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 CRYBB3P26998 211 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 CEACAM8P31997 349 aaPredicted RBP7.07□□□□□ -1.28
GABPB1-205ENST00000429662 BPIFB3P59826 476 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 ETFRF1Q6IPR1 90 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 FAM231DQ6ZW35 169 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 PDPNQ86YL7 162 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 LINC00311Q8N616 119 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 SIGLECL1Q8N7X8 197 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 OR5AN1Q8NGI8 311 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 TMEM167AQ8TBQ9 72 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF596Q8TC21 504 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 WIPF2Q8TF74 440 aaPredicted RBP7.07□□□□□ -1.28
GABPB1-205ENST00000429662 TMEM186Q96B77 213 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 SLC25A33Q9BSK2 321 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 SAMD10Q9BYL1 202 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 DNAJC4Q9NNZ3 241 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 NDUFA4L2Q9NRX3 87 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF586Q9NXT0 402 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 CDC42EP3Q9UKI2 254 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 POLR3KQ9Y2Y1 108 aaPredicted RBP7.07□□□□□ -1.28
GABPB1-205ENST00000429662 IZUMO1RA6ND01 250 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 SLC17A3O00476 420 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 SAA1P0DJI8 122 aaPredicted RBP7.06□□□□□ -1.28
GABPB1-205ENST00000429662 FOSL1P15407 271 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 RAB4AP20338 218 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 BMP5P22003 454 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 CBLN1P23435 193 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 CD40P25942 277 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 MC5RP33032 325 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 IER3P46695 156 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 RPL8P62917 257 aaKnown RBP7.06□□□□□ -1.28
GABPB1-205ENST00000429662 FAM162BQ5T6X4 162 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 VHLLQ6RSH7 139 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 TMEM108Q6UXF1 575 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 Q6ZS92 163 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 TCF23Q7RTU1 214 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 OR8I2Q8N0Y5 310 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 OR4C13Q8NGP0 309 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 LEAP2Q969E1 77 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 FLYWCH2Q96CP2 140 aaKnown RBP7.06□□□□□ -1.28
GABPB1-205ENST00000429662 CCL13Q99616 98 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 MIEN1Q9BRT3 115 aa7.06□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF430Q9H8G1 570 aaPredicted RBP7.06□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF331Q9NQX6 463 aaPredicted RBP7.06□□□□□ -1.28
GABPB1-205ENST00000429662 KIAA2026Q5HYC2 2103 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 ANK3Q12955 4377 aaKnown RBP7.05□□□□□ -1.28
GABPB1-205ENST00000429662 H0YJW9 148 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 TCAPO15273 167 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 SERF1AO75920 110 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 ACTL6BO94805 426 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 IGHV3-7P01780 117 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 NDUFB7P17568 137 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 HNF1AP20823 631 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 GNG10P50151 68 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 SUMO1P63165 101 aaKnown RBP7.05□□□□□ -1.28
GABPB1-205ENST00000429662 PRSS8Q16651 343 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 IBA57Q5T440 356 aaKnown RBP7.05□□□□□ -1.28
GABPB1-205ENST00000429662 CYB5R2Q6BCY4 276 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 TOMM20LQ6UXN7 152 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 TMEM136Q6ZRR5 245 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 C19orf35Q6ZS72 473 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 THAP8Q8NA92 274 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 OR4B1Q8NGF8 309 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 FAM57AQ8TBR7 257 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 ITLN2Q8WWU7 325 aaPredicted RBP7.05□□□□□ -1.28
GABPB1-205ENST00000429662 GRAMD2BQ96HH9 432 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 IGF2BP2-AS1Q96M15 143 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 HARBI1Q96MB7 349 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 RBM14Q96PK6 669 aaKnown RBP7.05□□□□□ -1.28
GABPB1-205ENST00000429662 HSPB9Q9BQS6 159 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 MRPL27Q9P0M9 148 aaKnown RBP7.05□□□□□ -1.28
GABPB1-205ENST00000429662 NAT8BQ9UHF3 227 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 FAM215AQ9Y5M1 114 aa7.05□□□□□ -1.28
GABPB1-205ENST00000429662 KRTAP9-6A0A140TA67 174 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 TCRBV4S1A1TA0A5B7 111 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 GRIFINA4D1Z8 144 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 SRRM4A7MD48 611 aaKnown RBP7.04□□□□□ -1.28
GABPB1-205ENST00000429662 NUPR1O60356 82 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 COX7A2P2O60397 106 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 GPX1P07203 203 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 LGALS7P47929 136 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 COMPP49747 757 aaPredicted RBP7.04□□□□□ -1.28
GABPB1-205ENST00000429662 UBE2L3P68036 154 aaKnown RBP7.04□□□□□ -1.28
GABPB1-205ENST00000429662 VMA21Q3ZAQ7 101 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 SPRNQ5BIV9 151 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 TPTE2P1Q5T6R2 138 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 C10orf113Q5VZT2 155 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 Q6ZWC4 215 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 PRIMA1Q86XR5 153 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 OR10X1Q8NGY0 326 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF503Q96F45 646 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 KCNS1Q96KK3 526 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 NEU1Q99519 415 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 VAMP8Q9BV40 100 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 TP53TG3Q9ULZ0 132 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 WASHC3Q9Y3C0 194 aa7.04□□□□□ -1.28
GABPB1-205ENST00000429662 AKAP6Q13023 2319 aa7.03□□□□□ -1.28
GABPB1-205ENST00000429662 USF3Q68DE3 2245 aa7.03□□□□□ -1.28
GABPB1-205ENST00000429662 PPIAL4EA0A075B759 164 aa7.03□□□□□ -1.28
GABPB1-205ENST00000429662 IGKV1OR2-108A0A075B7D4 117 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms