RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 PTH2Q96A98 100 aa0.03□□□□□ -2.4
CCDC144A-208ENST00000428950 SLC39A9Q9NUM3 307 aa0.03□□□□□ -2.4
CCDC144A-208ENST00000428950 SLC35A3Q9Y2D2 325 aa0.03□□□□□ -2.4
CCDC144A-208ENST00000428950 LSM5Q9Y4Y9 91 aaKnown RBP0.03□□□□□ -2.4
CCDC144A-208ENST00000428950 ROBO3Q96MS0 1386 aa0.03□□□□□ -2.4
CCDC144A-208ENST00000428950 MAP3K5Q99683 1374 aa0.03□□□□□ -2.4
CCDC144A-208ENST00000428950 DSTQ03001 7570 aaKnown RBP0.03□□□□□ -2.41
CCDC144A-208ENST00000428950 C9orf84Q5VXU9 1444 aa0.03□□□□□ -2.41
CCDC144A-208ENST00000428950 ZDBF2Q9HCK1 2354 aa0.03□□□□□ -2.41
CCDC144A-208ENST00000428950 SNAPC4Q5SXM2 1469 aa0.03□□□□□ -2.41
CCDC144A-208ENST00000428950 TRAV9-1A0A075B6T8 112 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 EXOC1LA0A1B0GW35 172 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 PQLC2LA1A4F0 135 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 DPRXA6NFQ7 191 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 ISG15P05161 165 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 HIST1H1EP10412 219 aaKnown RBP0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 MGST1P10620 155 aaKnown RBP0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 OR2F1Q13607 317 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 CDKL4Q5MAI5 379 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 LINC00575Q6W349 94 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 DNAJC9Q8WXX5 260 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 TOMM6Q96B49 74 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 TSPAN32Q96QS1 320 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 PARD6GQ9BYG4 376 aaPredicted RBP0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 PRTFDC1Q9NRG1 225 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 USE1Q9NZ43 259 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 MRPL27Q9P0M9 148 aaKnown RBP0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 TMEM14CQ9P0S9 112 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 ERGIC3Q9Y282 383 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 ATP6V1DQ9Y5K8 247 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 CACNA1EQ15878 2313 aa0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 MED1Q15648 1581 aaPredicted RBP0.02□□□□□ -2.41
CCDC144A-208ENST00000428950 KIF1BO60333 1816 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 MUC4Q99102 2169 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 FAM236DA0A1B0GTK5 79 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 CCDC160A6NGH7 325 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 CCL25O15444 150 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 CHP2O43745 196 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 DCTN3O75935 186 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 IGLV3-1P01715 115 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 FAM236CP0DP71 79 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 HOXA6P31267 233 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 ACOT6Q3I5F7 207 aaPredicted RBP0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 LINC01554Q52M75 96 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 HIST2H3PS2Q5TEC6 136 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 C8orf74Q6P047 294 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 LINC00322Q6ZN03 302 aaPredicted RBP0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 LCA10Q71F78 164 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 TRAPPC6BQ86SZ2 158 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 C20orf196Q8IYI0 205 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 EXOC3-AS1Q8N2X6 119 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 C12orf45Q8N5I9 185 aaPredicted RBP0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 PLPP5Q8NEB5 264 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 OR11H6Q8NGC7 330 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 OR13D1Q8NGV5 346 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 WFDC5Q8TCV5 224 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 ADAT3Q96EY9 351 aaPredicted RBP0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 OR52E6Q96RD3 313 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 DRC3Q9H069 523 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 UBAP1Q9NZ09 502 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 CHCHD2Q9Y6H1 151 aaPredicted RBP0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 NUP155O75694 1391 aa0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 MYO5AQ9Y4I1 1855 aaKnown RBP0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 IGLV3-32A0A0A0MS00 114 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 TRAV26-2A0A0B4J265 109 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 A0A0D9SG42 100 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 C7orf71A4D174 169 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 OR2T8A6NH00 312 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 RIMBP3CA6NJZ7 1639 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 RIMBP3BA6NNM3 1639 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 CALB1P05937 261 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 SMIM10L2AP0DMW4 78 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 SMIM10L2BP0DMW5 78 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 NKX2-5P52952 324 aaPredicted RBP0□□□□□ -2.41
CCDC144A-208ENST00000428950 AP2S1P53680 142 aaPredicted RBP0□□□□□ -2.41
CCDC144A-208ENST00000428950 SPINK7P58062 85 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 SPCS3P61009 180 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 ZGRF1Q86YA3 2104 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 Q8IYB0 196 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 OR8D4Q8NGM9 314 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 GPR146Q96CH1 333 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 CFAP53Q96M91 514 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 RIMBP3Q9UFD9 1639 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 EPDR1Q9UM22 224 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 TMEM56-RWDD3S4R434 201 aa0□□□□□ -2.41
CCDC144A-208ENST00000428950 FREM3P0C091 2139 aa-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 NUP210LQ5VU65 1888 aa-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 MYO3BQ8WXR4 1341 aa-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 TRBV6-4A0A1B0GX49 114 aa-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 OR4C46A6NHA9 309 aa-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 CCL16O15467 120 aa-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 KLF7O75840 302 aaPredicted RBP-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 DNAL4O96015 105 aa-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 IFNA5P01569 189 aa-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 S100A4P26447 101 aaKnown RBP-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 YPEL3P61236 119 aaPredicted RBP-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 PSME3P61289 254 aa-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 HIST3H3Q16695 136 aa-0.01□□□□□ -2.41
CCDC144A-208ENST00000428950 CLECL1Q8IZS7 167 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 430.7 ms