RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 LDLRAD4O15165 306 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 SNAI2O43623 268 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 DPM2O94777 84 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 LYNX1P0DP58 116 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 PRB3Q04118 309 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-208ENST00000428599 Q5PR19 223 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 WFDC12Q8WWY7 111 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 LAMTOR3Q9UHA4 124 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 SPCS1Q9Y6A9 102 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 ARHGEF17Q96PE2 2063 aaPredicted RBP7.44□□□□□ -1.22
CTNND1-208ENST00000428599 ATXN8Q156A1 80 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 UNQ6494/PRO21346Q6UXR6 183 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 MESP1Q9BRJ9 268 aa7.44□□□□□ -1.22
CTNND1-208ENST00000428599 PGPEP1LA6NFU8 196 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 HIGD1CA8MV81 97 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 NMBP08949 121 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 SLC25A16P16260 332 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 LHX2P50458 406 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 EDA2RQ9HAV5 297 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 INS-IGF2F8WCM5 200 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 PAX4O43316 350 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 INSP01308 110 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 GATA2P23769 480 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-208ENST00000428599 GATD1Q8NB37 220 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 M0R2P5 195 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 UCP1P25874 307 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 GNG5P63218 68 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 COQ2Q96H96 371 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 PSG8Q9UQ74 426 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 TRAV8-4A0A0B4J246 113 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 E9PQ18 207 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 PIN1P1O15428 100 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 IL18BPO95998 194 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 IGKV1D-43A0A0B4J1Z2 117 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 PQLC2LA1A4F0 135 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 CA1P00915 261 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-208ENST00000428599 ZNF672Q499Z4 452 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-208ENST00000428599 MINOS1Q5TGZ0 78 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 RASL10AQ92737 203 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 DEPPQ9NTK1 212 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 EPDR1Q9UM22 224 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 MINOS1-NBL1R4GNA1 71 aa7.43□□□□□ -1.22
CTNND1-208ENST00000428599 TEX38Q6PEX7 206 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 LINC01356Q8N9X3 169 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 KLHL30-AS1Q8NEE0 82 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 TMEM190Q8WZ59 177 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 A0A0U1RRA0 63 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 TMEM8BA6NDV4 472 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 ATP5G3P48201 142 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 MORN2Q502X0 79 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 LINC00527Q9UJ94 153 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 ANAPC10Q9UM13 185 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 IGHV1-18A0A0C4DH31 117 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 OOSP1A8MZH6 123 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 SEC11AP67812 179 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 SPSB3Q6PJ21 355 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 NCOR1O75376 2440 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 ICE1Q9Y2F5 2266 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 CTAG1AP78358 180 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 FBLIM1Q8WUP2 373 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 DOCK4Q8N1I0 1966 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 ZNF98A6NK75 572 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 HOXD3P31249 432 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-208ENST00000428599 PLPPR1Q8TBJ4 325 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 C5orf30Q96GV9 206 aa7.42□□□□□ -1.22
CTNND1-208ENST00000428599 TIMP3P35625 211 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 CD300CQ08708 224 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 SS18Q15532 418 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 LCNL1Q6ZST4 164 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 C17orf82Q86X59 251 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-208ENST00000428599 C14orf144Q96I85 54 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 TMEM238C9JI98 176 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 LGALS1P09382 135 aaKnown RBP7.41□□□□□ -1.22
CTNND1-208ENST00000428599 ACTL10Q5JWF8 245 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 C1QL2Q7Z5L3 287 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 PIP4P2Q8N4L2 257 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 IMMP2LQ96T52 175 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 SSBP4Q9BWG4 385 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-208ENST00000428599 VWC2LB2RUY7 222 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 ERCC8Q13216 396 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 C6orf226Q5I0X4 101 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 NR2C2APQ86WQ0 139 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 TMEM219Q86XT9 240 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 ZNF837Q96EG3 531 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-208ENST00000428599 SDK2Q58EX2 2172 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 TRBV7-1A0A0A6YYK4 115 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 PINLYPA6NC86 204 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 IGHV1-46P01743 117 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 IGHV3-53P01767 116 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 RIPPLY3P57055 190 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 CD200R1LQ6Q8B3 271 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 ST6GALNAC6Q969X2 333 aa7.41□□□□□ -1.22
CTNND1-208ENST00000428599 IGHV2-26A0A0B4J1V2 119 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 IGHV3-73A0A0B4J1V6 119 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 H3BUX3 64 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 IGKCP01834 107 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 CGB3P0DN86 165 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 C15orf32Q32M92 178 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 BMPERQ8N8U9 685 aa7.4□□□□□ -1.22
CTNND1-208ENST00000428599 IGHV3-64A0A075B6Q5 118 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms