RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 ZNF355PQ9NSJ1 428 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 TRBV20OR9-2A0A075B6H5 130 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 IGHV3OR16-10A0A075B7F0 116 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 CORTO00230 105 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 PYYP10082 97 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 SELENOTP62341 195 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 CLEC12BQ2HXU8 276 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 PQLC2Q6ZP29 291 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 OR5AU1Q8NGC0 362 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 SLC25A2Q9BXI2 301 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 TMEM242Q9NWH2 141 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 S4R3C0 116 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 POLQO75417 2590 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 TMEM11P17152 192 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 CTRB1P17538 263 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 SUMO1P63165 101 aaKnown RBP8.25□□□□□ -1.09
HDAC9-210ENST00000428307 CTRB2Q6GPI1 263 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 LINC00305Q7Z4B0 112 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 LINC01551Q86U37 167 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 PERPQ96FX8 193 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 FAM167A-AS1Q96KT0 104 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 TXNDC17Q9BRA2 123 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 TMEM167BQ9NRX6 74 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 A1L4Q6 167 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 I3L2K1 104 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 UBE2L3P68036 154 aaKnown RBP8.25□□□□□ -1.09
HDAC9-210ENST00000428307 NDPQ00604 133 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 ZNF562Q6V9R5 426 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 ZNF843Q8N446 348 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 OR1L4Q8NGR5 311 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 MALSU1Q96EH3 234 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 AJUBAQ96IF1 538 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 PFDN5Q99471 154 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 PIMREGQ9BSJ6 248 aa8.25□□□□□ -1.09
HDAC9-210ENST00000428307 OOSP1A8MZH6 123 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 H7BYZ3 331 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 CRYBB3P26998 211 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 BPIFB3P59826 476 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 SNRPEP62304 92 aaKnown RBP8.24□□□□□ -1.09
HDAC9-210ENST00000428307 ELOVL1Q9BW60 279 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 MRPL32Q9BYC8 188 aaKnown RBP8.24□□□□□ -1.09
HDAC9-210ENST00000428307 CTDSP1Q9GZU7 261 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 PRELID1Q9Y255 219 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 IGHV4-30-2A0A087WSY4 118 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 CENPVL3A0A0U1RRI6 287 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 GGTLC3B5MD39 225 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 NDUFS6O75380 124 aaKnown RBP8.24□□□□□ -1.09
HDAC9-210ENST00000428307 FAM106CPP0CH98 169 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 LEMD1Q68G75 181 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 CLEC2AQ6UVW9 174 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 Q8N6K4 173 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 C10orf105Q8TEF2 133 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 ARPC1AQ92747 370 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 FAM210BQ96KR6 192 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 TRGV9Q99603 122 aa8.24□□□□□ -1.09
HDAC9-210ENST00000428307 TBL2Q9Y4P3 447 aaKnown RBP8.24□□□□□ -1.09
HDAC9-210ENST00000428307 ELOA3CA0A087WX78 387 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-210ENST00000428307 K7EIM0 57 aa8.23□□□□□ -1.09
HDAC9-210ENST00000428307 S100A6P06703 90 aa8.23□□□□□ -1.09
HDAC9-210ENST00000428307 IGLC1P0CG04 106 aa8.23□□□□□ -1.09
HDAC9-210ENST00000428307 PSG1P11464 419 aa8.23□□□□□ -1.09
HDAC9-210ENST00000428307 RPL35P42766 123 aaKnown RBP8.23□□□□□ -1.09
HDAC9-210ENST00000428307 ASPHD1Q5U4P2 390 aa8.23□□□□□ -1.09
HDAC9-210ENST00000428307 OCC1Q8TAD7 63 aa8.23□□□□□ -1.09
HDAC9-210ENST00000428307 RNF2Q99496 336 aa8.23□□□□□ -1.09
HDAC9-210ENST00000428307 SPOCK3Q9BQ16 436 aa8.23□□□□□ -1.09
HDAC9-210ENST00000428307 SRSF8Q9BRL6 282 aaKnown RBP8.23□□□□□ -1.09
HDAC9-210ENST00000428307 PAXXQ9BUH6 204 aa8.23□□□□□ -1.09
HDAC9-210ENST00000428307 OR51M1Q9H341 326 aa8.23□□□□□ -1.09
HDAC9-210ENST00000428307 BIN3Q9NQY0 253 aa8.23□□□□□ -1.09
HDAC9-210ENST00000428307 KLF2Q9Y5W3 355 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-210ENST00000428307 USP9YO00507 2555 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-210ENST00000428307 NPFFO15130 113 aa8.22□□□□□ -1.09
HDAC9-210ENST00000428307 GALR1P47211 349 aa8.22□□□□□ -1.09
HDAC9-210ENST00000428307 AKR1D1P51857 326 aa8.22□□□□□ -1.09
HDAC9-210ENST00000428307 EBI3Q14213 229 aa8.22□□□□□ -1.09
HDAC9-210ENST00000428307 TIGITQ495A1 244 aa8.22□□□□□ -1.09
HDAC9-210ENST00000428307 BRD3OSQ6XYD6 125 aa8.22□□□□□ -1.09
HDAC9-210ENST00000428307 RBM14Q96PK6 669 aaKnown RBP8.22□□□□□ -1.09
HDAC9-210ENST00000428307 RASL11BQ9BPW5 248 aa8.22□□□□□ -1.09
HDAC9-210ENST00000428307 HYPMO75409 117 aa8.22□□□□□ -1.09
HDAC9-210ENST00000428307 BRS3P32247 399 aa8.22□□□□□ -1.09
HDAC9-210ENST00000428307 LYZP61626 148 aa8.22□□□□□ -1.09
HDAC9-210ENST00000428307 OR5B12Q96R08 314 aa8.22□□□□□ -1.09
HDAC9-210ENST00000428307 HELTA6NFD8 242 aa8.21□□□□□ -1.09
HDAC9-210ENST00000428307 SH2D7A6NKC9 451 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-210ENST00000428307 TSPAN9O75954 239 aa8.21□□□□□ -1.09
HDAC9-210ENST00000428307 IGKV1-17P01599 117 aa8.21□□□□□ -1.09
HDAC9-210ENST00000428307 TRGC2P03986 189 aa8.21□□□□□ -1.09
HDAC9-210ENST00000428307 PFN1P07737 140 aaKnown RBP8.21□□□□□ -1.09
HDAC9-210ENST00000428307 FBN2P35556 2912 aa8.21□□□□□ -1.09
HDAC9-210ENST00000428307 FAM3BP58499 235 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-210ENST00000428307 RANP62826 216 aaKnown RBP8.21□□□□□ -1.09
HDAC9-210ENST00000428307 PAX8Q06710 450 aa8.21□□□□□ -1.09
HDAC9-210ENST00000428307 SRSF1Q07955 248 aaKnown RBP eCLIP8.21□□□□□ -1.09
HDAC9-210ENST00000428307 Q8N9W7 124 aa8.21□□□□□ -1.09
HDAC9-210ENST00000428307 BLNKQ8WV28 456 aa8.21□□□□□ -1.09
HDAC9-210ENST00000428307 ANAPC16Q96DE5 110 aa8.21□□□□□ -1.09
HDAC9-210ENST00000428307 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.09
HDAC9-210ENST00000428307 PTPN13Q12923 2485 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms