RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 CENPVQ7Z7K6 275 aaPredicted RBP12.06□□□□□ -0.48
PTPRU-204ENST00000428026 OTORQ9NRC9 128 aa12.06□□□□□ -0.48
PTPRU-204ENST00000428026 PAX2Q02962 417 aa12.06□□□□□ -0.48
PTPRU-204ENST00000428026 SUPT4H1P63272 117 aaKnown RBP12.06□□□□□ -0.48
PTPRU-204ENST00000428026 KIR3DL3Q8N743 410 aa12.06□□□□□ -0.48
PTPRU-204ENST00000428026 BMPERQ8N8U9 685 aa12.06□□□□□ -0.48
PTPRU-204ENST00000428026 CCL3L1P16619 93 aa12.06□□□□□ -0.48
PTPRU-204ENST00000428026 FAM27E3Q08E93 113 aa12.06□□□□□ -0.48
PTPRU-204ENST00000428026 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.06□□□□□ -0.48
PTPRU-204ENST00000428026 FXYD7P58549 80 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 FLVCR1-AS1Q8TAF5 88 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 WBP1Q96G27 269 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 hDV102S1A0JD36 115 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 H3BRM9 83 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 SPATA31B1PQ5VZV4 182 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 UPK2O00526 184 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 ATP5J2P56134 94 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 NPFFR1Q9GZQ6 430 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 ARHGEF17Q96PE2 2063 aaPredicted RBP12.05□□□□□ -0.48
PTPRU-204ENST00000428026 IGHV3-64A0A075B6Q5 118 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 C15orf61A6NNL5 157 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 TPTE2P1Q5T6R2 138 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 FAM89BQ8N5H3 189 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 FNDC1Q4ZHG4 1894 aaPredicted RBP12.05□□□□□ -0.48
PTPRU-204ENST00000428026 CHD5Q8TDI0 1954 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 ZNF815PA8K554 130 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 J3QW42 95 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 MPZP25189 248 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 MAJINQ3KP22 176 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 TMEM242Q9NWH2 141 aa12.05□□□□□ -0.48
PTPRU-204ENST00000428026 GLRXP35754 106 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 GAGE13Q4V321 117 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 A0A087X0K7 114 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 IGKCP01834 107 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 FBLN5Q9UBX5 448 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 A0A0U1RRA0 63 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 SRSF4Q08170 494 aaKnown RBP12.04□□□□□ -0.48
PTPRU-204ENST00000428026 UNQ6494/PRO21346Q6UXR6 183 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 RTN4RL2Q86UN3 420 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 ZNF664Q8N3J9 261 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 ANK1P16157 1881 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 VWA8A3KMH1 1905 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 HSD52Q0P140 79 aa12.04□□□□□ -0.48
PTPRU-204ENST00000428026 AKAP6Q13023 2319 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 IGLV3-12A0A075B6K2 115 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 TRAV8-4A0A0B4J246 113 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 FABP5P3A8MUU1 101 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 CNTFRP26992 372 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 GTSCR1Q86UQ5 136 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 DEFB104AQ8WTQ1 72 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 ST20Q9HBF5 79 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 DPM3Q9P2X0 92 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 PSG8Q9UQ74 426 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 ADCYAP1P18509 176 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 ARPC1AQ92747 370 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 DUX3Q96PT4 197 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 CD24P25063 80 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 SEC11AP67812 179 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 MPV17L2Q567V2 206 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 TSKUQ8WUA8 353 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 ZFHX2Q9C0A1 2572 aaPredicted RBP12.03□□□□□ -0.48
PTPRU-204ENST00000428026 IGHV2OR16-5A0A0B4J2B6 119 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 CD300EQ496F6 205 aaPredicted RBP12.03□□□□□ -0.48
PTPRU-204ENST00000428026 WDR83OSQ9Y284 106 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 IGHV3-11P01762 117 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 LHX2P50458 406 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 ZNF497Q6ZNH5 498 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 C5orf24Q7Z6I8 188 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 PPP1R27Q86WC6 154 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 FAM57AQ8TBR7 257 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 GTSF1LQ9H1H1 148 aa12.03□□□□□ -0.48
PTPRU-204ENST00000428026 CHTOPQ9Y3Y2 248 aaKnown RBP12.03□□□□□ -0.48
PTPRU-204ENST00000428026 PI4KAP42356 2102 aa12.02□□□□□ -0.48
PTPRU-204ENST00000428026 A8MWV9 139 aa12.02□□□□□ -0.48
PTPRU-204ENST00000428026 TM4SF5O14894 197 aa12.02□□□□□ -0.48
PTPRU-204ENST00000428026 EREGO14944 169 aa12.02□□□□□ -0.48
PTPRU-204ENST00000428026 NCR2O95944 276 aa12.02□□□□□ -0.48
PTPRU-204ENST00000428026 LINC01551Q86U37 167 aa12.02□□□□□ -0.48
PTPRU-204ENST00000428026 CHCHD1Q96BP2 118 aaKnown RBP12.02□□□□□ -0.48
PTPRU-204ENST00000428026 A0A0G2JLM5 398 aa12.02□□□□□ -0.49
PTPRU-204ENST00000428026 RBMY1BA6NDE4 496 aaKnown RBP12.02□□□□□ -0.49
PTPRU-204ENST00000428026 RBMY1EA6NEQ0 496 aaKnown RBP12.02□□□□□ -0.49
PTPRU-204ENST00000428026 RBMY1DP0C7P1 496 aaKnown RBP12.02□□□□□ -0.49
PTPRU-204ENST00000428026 RBMY1A1P0DJD3 496 aaKnown RBP12.02□□□□□ -0.49
PTPRU-204ENST00000428026 RBMY1CP0DJD4 496 aa12.02□□□□□ -0.49
PTPRU-204ENST00000428026 PRTN3P24158 256 aa12.02□□□□□ -0.49
PTPRU-204ENST00000428026 SPTAN1Q13813 2472 aaKnown RBP12.02□□□□□ -0.49
PTPRU-204ENST00000428026 IGKV1-12A0A0C4DH73 117 aa12.02□□□□□ -0.49
PTPRU-204ENST00000428026 IGKV1D-12P01611 117 aa12.02□□□□□ -0.49
PTPRU-204ENST00000428026 MST1P26927 711 aa12.02□□□□□ -0.49
PTPRU-204ENST00000428026 SRSF1Q07955 248 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTPRU-204ENST00000428026 MORN2Q502X0 79 aa12.02□□□□□ -0.49
PTPRU-204ENST00000428026 PSMG4Q5JS54 123 aa12.02□□□□□ -0.49
PTPRU-204ENST00000428026 OR10W1Q8NGF6 305 aa12.02□□□□□ -0.49
PTPRU-204ENST00000428026 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.49
PTPRU-204ENST00000428026 MTCL1Q9Y4B5 1905 aaKnown RBP12.02□□□□□ -0.49
PTPRU-204ENST00000428026 IGHV1-2P23083 117 aa12.02□□□□□ -0.49
PTPRU-204ENST00000428026 TREML4Q6UXN2 200 aa12.02□□□□□ -0.49
PTPRU-204ENST00000428026 BDP1A6H8Y1 2624 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms