RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 VAMP3Q15836 100 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 LEMD1Q68G75 181 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 TEX38Q6PEX7 206 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 SPRY4Q9C004 299 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 NCOR1P1Q9H4R4 102 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 SDF2L1Q9HCN8 221 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 NMSQ5H8A3 153 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 KIR2DL4Q99706 377 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 HS3ST6Q96QI5 342 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 A0A1B0GWJ7 208 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 TRGC2P03986 189 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 ZFP30Q9Y2G7 519 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 PLXND1Q9Y4D7 1925 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 DENND4CQ5VZ89 1909 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 TRAV3A0A0B4J244 114 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 IGHV2-70DA0A0C4DH43 119 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 A0A1W2PNU3 283 aaPredicted RBP11.34□□□□□ -0.59
RPL28-202ENST00000426763 M0R381 172 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 GTSCR1Q86UQ5 136 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 USMG5Q96IX5 58 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 ATG101Q9BSB4 218 aa11.34□□□□□ -0.59
RPL28-202ENST00000426763 TRBV7-1A0A0A6YYK4 115 aa11.33□□□□□ -0.6
RPL28-202ENST00000426763 TGIF2-C20orf24A0A0A6YYL0 155 aa11.33□□□□□ -0.6
RPL28-202ENST00000426763 SRP19P09132 144 aaKnown RBP11.33□□□□□ -0.6
RPL28-202ENST00000426763 RPL13AP40429 203 aaKnown RBP11.33□□□□□ -0.6
RPL28-202ENST00000426763 CMC4P56277 68 aaPredicted RBP11.33□□□□□ -0.6
RPL28-202ENST00000426763 TREML4Q6UXN2 200 aa11.33□□□□□ -0.6
RPL28-202ENST00000426763 F11RQ9Y624 299 aaKnown RBP11.33□□□□□ -0.6
RPL28-202ENST00000426763 AKAP6Q13023 2319 aa11.33□□□□□ -0.6
RPL28-202ENST00000426763 TEX36Q5VZQ5 186 aa11.33□□□□□ -0.6
RPL28-202ENST00000426763 SIGLEC15Q6ZMC9 328 aa11.33□□□□□ -0.6
RPL28-202ENST00000426763 FER1L5A0AVI2 2057 aa11.33□□□□□ -0.6
RPL28-202ENST00000426763 TRBV20OR9-2A0A075B6H5 130 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 IGHV1-69DA0A0B4J2H0 117 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 IGHV1-69P01742 117 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 A0A1W2PRE2 83 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 KCNS1Q96KK3 526 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 ASCL2Q99929 193 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 RPP21Q9H633 154 aaKnown RBP11.32□□□□□ -0.6
RPL28-202ENST00000426763 CD5P06127 495 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 PYYP10082 97 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 WDR86Q86TI4 376 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 RUSC1-AS1Q66K80 236 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 Q6AWC8 147 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 MAPK1IP1LQ8NDC0 245 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 TBX15Q96SF7 602 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 FAM223BA6NKX1 122 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 SAP30O75446 220 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 FAM223AQ8IWN6 122 aa11.32□□□□□ -0.6
RPL28-202ENST00000426763 HEATR5AQ86XA9 2040 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 PKDREJQ9NTG1 2253 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 J3QLI3 93 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 PPP1R17O96001 155 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 SRIP30626 198 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 ABCA4P78363 2273 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 CFHR2P36980 270 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
RPL28-202ENST00000426763 TRGV9Q99603 122 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 SRSF8Q9BRL6 282 aaKnown RBP11.31□□□□□ -0.6
RPL28-202ENST00000426763 DCAF16Q9NXF7 216 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 EPDR1Q9UM22 224 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 FABP5P3A8MUU1 101 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 M0R143 59 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 RSPO1Q2MKA7 263 aaPredicted RBP11.31□□□□□ -0.6
RPL28-202ENST00000426763 ZMAT5Q9UDW3 170 aaKnown RBP11.31□□□□□ -0.6
RPL28-202ENST00000426763 TNFRSF18Q9Y5U5 241 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 OVOL1O14753 267 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 LYRM7Q5U5X0 104 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 GLMPQ8WWB7 406 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 IL36BQ9NZH7 164 aa11.31□□□□□ -0.6
RPL28-202ENST00000426763 PSG1P11464 419 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 ERVK11-1P61568 191 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 ZNF502Q8TBZ5 544 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 GGTLC1Q9BX51 225 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 PRO1933Q9H354 126 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 LOXP28300 417 aaPredicted RBP11.3□□□□□ -0.6
RPL28-202ENST00000426763 GNG5P63218 68 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 PIP4P2Q8N4L2 257 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 OR1N2Q8NGR9 330 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 WFDC1Q9HC57 220 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 COL4A4P53420 1690 aaPredicted RBP11.3□□□□□ -0.6
RPL28-202ENST00000426763 A0A1B0GUT8 65 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 KLF17Q5JT82 389 aaPredicted RBP11.3□□□□□ -0.6
RPL28-202ENST00000426763 PAPPA-AS1Q5QFB9 102 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 SOX21Q9Y651 276 aaPredicted RBP11.3□□□□□ -0.6
RPL28-202ENST00000426763 SPTAN1Q13813 2472 aaKnown RBP11.3□□□□□ -0.6
RPL28-202ENST00000426763 LEPROTL1O95214 131 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 FER1L6-AS1Q8NA97 138 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 VN1R17PQ8TDU5 208 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 PLXNB3Q9ULL4 1909 aa11.3□□□□□ -0.6
RPL28-202ENST00000426763 M0R3E3 92 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 ZNF324O75467 553 aaPredicted RBP11.29□□□□□ -0.6
RPL28-202ENST00000426763 GCSHP23434 173 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 TMEM190Q8WZ59 177 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 TRGV2A0A075B6R0 118 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 A0A1B0GW15 77 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 CCL20P78556 96 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 TMEM14EPQ6UXP3 125 aa11.29□□□□□ -0.6
RPL28-202ENST00000426763 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms