RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 FAM78BQ5VT40 261 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 SPNS3Q6ZMD2 512 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 LURAP1LQ8IV03 231 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 CYB561D1Q8N8Q1 229 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 FANCD2OSQ96PS1 177 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 SSX3Q99909 188 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 DNAJC4Q9NNZ3 241 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 TMEM250H0YL14 139 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 TGFAP01135 160 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 IGHV4-31P0DP07 118 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 TAS2R45P59539 299 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 ZNF90Q03938 601 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 KRTAP1-3Q8IUG1 177 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 CLRN3Q8NCR9 226 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 ZNF48Q96MX3 618 aaPredicted RBP11.37□□□□□ -0.59
CDK3-201ENST00000425876 HSPB9Q9BQS6 159 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 TECRQ9NZ01 308 aaKnown RBP11.37□□□□□ -0.59
CDK3-201ENST00000425876 THYN1Q9P016 225 aa11.37□□□□□ -0.59
CDK3-201ENST00000425876 CREBBPQ92793 2442 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 ELOA3CA0A087WX78 387 aaPredicted RBP11.36□□□□□ -0.59
CDK3-201ENST00000425876 CLN5O75503 358 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 IGLC1P0CG04 106 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 HIST1H1BP16401 226 aaKnown RBP11.36□□□□□ -0.59
CDK3-201ENST00000425876 GCHFRP30047 84 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 CD81P60033 236 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 PLP1P60201 277 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 SPATA31B1PQ5VZV4 182 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 PQLC2Q6ZP29 291 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 MIR17HGQ75NE6 70 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 IQCF2Q8IXL9 164 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 FAM110DQ8TAY7 271 aaPredicted RBP11.36□□□□□ -0.59
CDK3-201ENST00000425876 SUN5Q8TC36 379 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 TMEM37Q8WXS4 190 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 ARL2-SNX15V9GYD0 113 aa11.36□□□□□ -0.59
CDK3-201ENST00000425876 AKAP9Q99996 3911 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 A6NDX4 124 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 COX7A2P2O60397 106 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 PAGE4O60829 102 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 FABP1P07148 127 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 NPBWR1P48145 328 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 CRIP2P52943 208 aaPredicted RBP11.35□□□□□ -0.59
CDK3-201ENST00000425876 BTN1A1Q13410 526 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 FAM90A2PQ658T7 463 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 C16orf82Q7Z2V1 217 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 Q96MF0 132 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 TMEM167BQ9NRX6 74 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 PITPNC1Q9UKF7 332 aa11.35□□□□□ -0.59
CDK3-201ENST00000425876 ABCA1O95477 2261 aa11.34□□□□□ -0.59
CDK3-201ENST00000425876 TRAV30A0A087WSZ9 112 aa11.34□□□□□ -0.59
CDK3-201ENST00000425876 IGHV3-21A0A0B4J1V1 117 aa11.34□□□□□ -0.59
CDK3-201ENST00000425876 M0QZK8 103 aa11.34□□□□□ -0.59
CDK3-201ENST00000425876 FSHBP01225 129 aa11.34□□□□□ -0.59
CDK3-201ENST00000425876 C8orf88P0DMB2 117 aa11.34□□□□□ -0.59
CDK3-201ENST00000425876 AKIRIN2Q53H80 203 aa11.34□□□□□ -0.59
CDK3-201ENST00000425876 ATP6V0E1O15342 81 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 AMY1AP04745 511 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 MFAP4P55083 255 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 C10orf113Q5VZT2 155 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 PATE2Q6UY27 113 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 TMEM219Q86XT9 240 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 C11orf94C9JXX5 98 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 H3BUX3 64 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 DNASE2O00115 360 aaPredicted RBP11.33□□□□□ -0.6
CDK3-201ENST00000425876 PDE6DO43924 150 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 IGKV1-17P01599 117 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 FCGR2BP31994 310 aaPredicted RBP11.33□□□□□ -0.6
CDK3-201ENST00000425876 FAM74A3Q4VXF1 159 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 UNQ5815/PRO19632Q6UWF5 114 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 C9orf139Q6ZV77 190 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 MAPK1IP1LQ8NDC0 245 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 OR5T1Q8NG75 326 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 NIPSNAP3BQ9BS92 247 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
CDK3-201ENST00000425876 PRRC2AP48634 2157 aaKnown RBP11.32□□□□□ -0.6
CDK3-201ENST00000425876 H3BQ15 152 aa11.32□□□□□ -0.6
CDK3-201ENST00000425876 HYPMO75409 117 aa11.32□□□□□ -0.6
CDK3-201ENST00000425876 CEBPGP53567 150 aa11.32□□□□□ -0.6
CDK3-201ENST00000425876 RHEBQ15382 184 aa11.32□□□□□ -0.6
CDK3-201ENST00000425876 AWAT1Q58HT5 328 aa11.32□□□□□ -0.6
CDK3-201ENST00000425876 OR4F5Q8NH21 305 aa11.32□□□□□ -0.6
CDK3-201ENST00000425876 VN1R17PQ8TDU5 208 aa11.32□□□□□ -0.6
CDK3-201ENST00000425876 FAM167A-AS1Q96KT0 104 aa11.32□□□□□ -0.6
CDK3-201ENST00000425876 OR4F4Q96R69 305 aa11.32□□□□□ -0.6
CDK3-201ENST00000425876 TXN2Q99757 166 aa11.32□□□□□ -0.6
CDK3-201ENST00000425876 SOX21Q9Y651 276 aaPredicted RBP11.32□□□□□ -0.6
CDK3-201ENST00000425876 CR1P17927 2039 aa11.32□□□□□ -0.6
CDK3-201ENST00000425876 OTOGQ6ZRI0 2925 aa11.31□□□□□ -0.6
CDK3-201ENST00000425876 F6UZH7 168 aa11.31□□□□□ -0.6
CDK3-201ENST00000425876 PSG1P11464 419 aa11.31□□□□□ -0.6
CDK3-201ENST00000425876 YPEL3P61236 119 aaPredicted RBP11.31□□□□□ -0.6
CDK3-201ENST00000425876 PNRC1Q12796 327 aaPredicted RBP11.31□□□□□ -0.6
CDK3-201ENST00000425876 C19orf54Q5BKX5 351 aa11.31□□□□□ -0.6
CDK3-201ENST00000425876 CYB5R2Q6BCY4 276 aa11.31□□□□□ -0.6
CDK3-201ENST00000425876 STXBP6Q8NFX7 210 aa11.31□□□□□ -0.6
CDK3-201ENST00000425876 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
CDK3-201ENST00000425876 ZNF503Q96F45 646 aa11.31□□□□□ -0.6
CDK3-201ENST00000425876 C21orf62Q9NYP8 219 aa11.31□□□□□ -0.6
CDK3-201ENST00000425876 PUS1Q9Y606 427 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDK3-201ENST00000425876 TRBV9A0A0B4J1U6 114 aa11.3□□□□□ -0.6
CDK3-201ENST00000425876 C7orf77A4D0Y5 90 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms