RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 OR11H12B2RN74 326 aa16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 CHEK1O14757 476 aa16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 TSPAN4O14817 238 aa16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 IFNA21P01568 189 aa16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 IGKV1-17P01599 117 aa16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 IGLC1P0CG04 106 aa16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 OR10J1P30954 320 aa16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 OR1S2Q8NGQ3 325 aa16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 RNF2Q99496 336 aa16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 SRD5A3Q9H8P0 318 aa16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 TBC1D24Q9ULP9 559 aa16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 PAIP2BQ9ULR5 123 aaKnown RBP16.73■□□□□ 0.27
PTCHD3P2-201ENST00000424937 SYNGR2O43760 224 aa16.72■□□□□ 0.27
PTCHD3P2-201ENST00000424937 ATP5IP56385 69 aaPredicted RBP16.72■□□□□ 0.27
PTCHD3P2-201ENST00000424937 NPIPB3Q92617 1050 aa16.72■□□□□ 0.27
PTCHD3P2-201ENST00000424937 CIB3Q96Q77 187 aaPredicted RBP16.72■□□□□ 0.27
PTCHD3P2-201ENST00000424937 WRBO00258 174 aa16.71■□□□□ 0.27
PTCHD3P2-201ENST00000424937 BMI1P35226 326 aa16.71■□□□□ 0.27
PTCHD3P2-201ENST00000424937 RAB11AP62491 216 aa16.71■□□□□ 0.27
PTCHD3P2-201ENST00000424937 MZT2BQ6NZ67 158 aa16.71■□□□□ 0.27
PTCHD3P2-201ENST00000424937 MITD1Q8WV92 249 aa16.71■□□□□ 0.27
PTCHD3P2-201ENST00000424937 HUWE1Q7Z6Z7 4374 aaKnown RBP16.71■□□□□ 0.27
PTCHD3P2-201ENST00000424937 FAM240BA0A1B0GVZ2 78 aa16.7■□□□□ 0.26
PTCHD3P2-201ENST00000424937 UPK1BO75841 260 aa16.7■□□□□ 0.26
PTCHD3P2-201ENST00000424937 ASAH1Q13510 395 aa16.7■□□□□ 0.26
PTCHD3P2-201ENST00000424937 ST8SIA2Q92186 375 aa16.7■□□□□ 0.26
PTCHD3P2-201ENST00000424937 ZMAT4Q9H898 229 aa16.7■□□□□ 0.26
PTCHD3P2-201ENST00000424937 IGHV3-66A0A0C4DH42 116 aa16.69■□□□□ 0.26
PTCHD3P2-201ENST00000424937 APOHP02749 345 aaPredicted RBP16.69■□□□□ 0.26
PTCHD3P2-201ENST00000424937 OR4D5Q8NGN0 318 aa16.69■□□□□ 0.26
PTCHD3P2-201ENST00000424937 SLC35E1Q96K37 410 aa16.69■□□□□ 0.26
PTCHD3P2-201ENST00000424937 RCHY1Q96PM5 261 aa16.69■□□□□ 0.26
PTCHD3P2-201ENST00000424937 METTL26Q96S19 204 aa16.69■□□□□ 0.26
PTCHD3P2-201ENST00000424937 SEC22CQ9BRL7 303 aa16.69■□□□□ 0.26
PTCHD3P2-201ENST00000424937 IGKV3-7A0A075B6H7 116 aa16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 OR4C46A6NHA9 309 aa16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 H3BP45 60 aa16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 H2AFB2P0C5Z0 115 aa16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 NKX2-1P43699 371 aaPredicted RBP16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 YPEL3P61236 119 aaPredicted RBP16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 POLR2GP62487 172 aaKnown RBP eCLIP16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 RPP30P78346 268 aaKnown RBP16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 HAGHQ16775 308 aa16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 IAH1Q2TAA2 248 aaPredicted RBP16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 Q8WTZ3 238 aa16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 TM2D3Q9BRN9 247 aa16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 UBQLN2Q9UHD9 624 aa16.68■□□□□ 0.26
PTCHD3P2-201ENST00000424937 SCGB1D2O95969 90 aa16.67■□□□□ 0.26
PTCHD3P2-201ENST00000424937 NPPCP23582 126 aa16.67■□□□□ 0.26
PTCHD3P2-201ENST00000424937 GPX4P36969 197 aaPredicted RBP16.67■□□□□ 0.26
PTCHD3P2-201ENST00000424937 ID3Q02535 119 aa16.67■□□□□ 0.26
PTCHD3P2-201ENST00000424937 SPANXN5Q5MJ07 72 aa16.67■□□□□ 0.26
PTCHD3P2-201ENST00000424937 TCF24Q7RTU0 167 aa16.67■□□□□ 0.26
PTCHD3P2-201ENST00000424937 TMEM231Q9H6L2 316 aa16.67■□□□□ 0.26
PTCHD3P2-201ENST00000424937 VSIRQ9H7M9 311 aa16.67■□□□□ 0.26
PTCHD3P2-201ENST00000424937 RBMY1BA6NDE4 496 aaKnown RBP16.66■□□□□ 0.26
PTCHD3P2-201ENST00000424937 RBMY1EA6NEQ0 496 aaKnown RBP16.66■□□□□ 0.26
PTCHD3P2-201ENST00000424937 CCSO14618 274 aa16.66■□□□□ 0.26
PTCHD3P2-201ENST00000424937 SSSCA1O60232 199 aa16.66■□□□□ 0.26
PTCHD3P2-201ENST00000424937 RBMY1DP0C7P1 496 aaKnown RBP16.66■□□□□ 0.26
PTCHD3P2-201ENST00000424937 TFPI2P48307 235 aa16.66■□□□□ 0.26
PTCHD3P2-201ENST00000424937 GAMTQ14353 236 aa16.66■□□□□ 0.26
PTCHD3P2-201ENST00000424937 ZNF431Q8TF32 576 aaPredicted RBP16.66■□□□□ 0.26
PTCHD3P2-201ENST00000424937 WWC2-AS2Q96NR7 200 aa16.66■□□□□ 0.26
PTCHD3P2-201ENST00000424937 A0A1W2PS18 150 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 ZFP92A6NM28 416 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 TOMM40O96008 361 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 IL4P05112 153 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 CRYBB3P26998 211 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 ODF3L2Q3SX64 289 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 FAM90A2PQ658T7 463 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 LINC00322Q6ZN03 302 aaPredicted RBP16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 LILRB2Q8N423 598 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 GBGT1Q8N5D6 347 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 ZBTB8BQ8NAP8 495 aaPredicted RBP16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 ENKURQ8TC29 256 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 NARS2Q96I59 477 aaKnown RBP16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 SPATA25Q9BR10 227 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 GSKIPQ9P0R6 139 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 STRAPQ9Y3F4 350 aaKnown RBP16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 TENM3Q9P273 2699 aa16.65■□□□□ 0.26
PTCHD3P2-201ENST00000424937 STAB2Q8WWQ8 2551 aa16.64■□□□□ 0.25
PTCHD3P2-201ENST00000424937 DFFBO76075 338 aa16.64■□□□□ 0.25
PTCHD3P2-201ENST00000424937 RD3LP0DJH9 198 aa16.64■□□□□ 0.25
PTCHD3P2-201ENST00000424937 IFITM3Q01628 133 aa16.64■□□□□ 0.25
PTCHD3P2-201ENST00000424937 CD5P06127 495 aa16.63■□□□□ 0.25
PTCHD3P2-201ENST00000424937 RPL11P62913 178 aaKnown RBP16.63■□□□□ 0.25
PTCHD3P2-201ENST00000424937 USF2Q15853 346 aaPredicted RBP16.63■□□□□ 0.25
PTCHD3P2-201ENST00000424937 CITED4Q96RK1 184 aa16.63■□□□□ 0.25
PTCHD3P2-201ENST00000424937 PSENENQ9NZ42 101 aa16.63■□□□□ 0.25
PTCHD3P2-201ENST00000424937 IGKV1D-37A0A075B6S9 117 aa16.62■□□□□ 0.25
PTCHD3P2-201ENST00000424937 FAM25EA8MYX2 175 aa16.62■□□□□ 0.25
PTCHD3P2-201ENST00000424937 PRSS46E5RG02 174 aa16.62■□□□□ 0.25
PTCHD3P2-201ENST00000424937 HNRNPCP07910 306 aaKnown RBP eCLIP16.62■□□□□ 0.25
PTCHD3P2-201ENST00000424937 PSG1P11464 419 aa16.62■□□□□ 0.25
PTCHD3P2-201ENST00000424937 P2RY1P47900 373 aa16.62■□□□□ 0.25
PTCHD3P2-201ENST00000424937 PAFAH1B2P68402 229 aa16.62■□□□□ 0.25
PTCHD3P2-201ENST00000424937 C12orf45Q8N5I9 185 aaPredicted RBP16.62■□□□□ 0.25
PTCHD3P2-201ENST00000424937 ZNF90Q03938 601 aa16.61■□□□□ 0.25
PTCHD3P2-201ENST00000424937 WFDC3Q8IUB2 231 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms