RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 METTL1Q9UBP6 276 aaKnown RBP2.56□□□□□ -2
SF3B1-205ENST00000424674 SNX12Q9UMY4 172 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 CELA1Q9UNI1 258 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 PHLDA3Q9Y5J5 127 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 DSPPQ9NZW4 1301 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 TNS2Q63HR2 1409 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 KDM5CP41229 1560 aa2.56□□□□□ -2
SF3B1-205ENST00000424674 DICER1Q9UPY3 1922 aaKnown RBP2.56□□□□□ -2
SF3B1-205ENST00000424674 A0A0G2JMM0 328 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 A0A1W2PPB8 328 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 A0A1W2PPR1 153 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 TMEM223A0PJW6 202 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 ZFP92A6NM28 416 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 KIR3DP1A8MWS1 328 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 PHOX2AO14813 284 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 HIST1H2BKO60814 126 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 IGHV1-46P01743 117 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 HIST1H2BJP06899 126 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 ZNF286BP0CG31 522 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 LSM3P62310 102 aaKnown RBP2.55□□□□□ -2
SF3B1-205ENST00000424674 MRPL51Q4U2R6 128 aaKnown RBP2.55□□□□□ -2
SF3B1-205ENST00000424674 PABPC1L2AQ5JQF8 200 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 CEP170Q5SW79 1584 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 C22orf39Q6P5X5 142 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 IZUMO2Q6UXV1 221 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 GKN2Q86XP6 184 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 ATOH7Q8N100 152 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 C4orf33Q8N1A6 199 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 C9orf62Q8N4C0 152 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 TEX29Q8N6K0 151 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 PACRGLQ8N7B6 248 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 ZFP62Q8NB50 900 aaPredicted RBP2.55□□□□□ -2
SF3B1-205ENST00000424674 OR5D16Q8NGK9 328 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 LINC01006Q8NI28 216 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 ITLN2Q8WWU7 325 aaPredicted RBP2.55□□□□□ -2
SF3B1-205ENST00000424674 COPS9Q8WXC6 57 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 DOCK6Q96HP0 2047 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 LINC00479Q96M42 142 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 MCEEQ96PE7 176 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 LHX9Q9NQ69 397 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 OSTCQ9NRP0 149 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 RPRMQ9NS64 109 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 MBD5Q9P267 1494 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 KIAA1107Q9UPP5 1409 aa2.55□□□□□ -2
SF3B1-205ENST00000424674 TP53BP1Q12888 1972 aaPredicted RBP2.54□□□□□ -2
SF3B1-205ENST00000424674 NCAPD3P42695 1498 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 ARHGAP23Q9P227 1491 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 NSD3Q9BZ95 1437 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 A0A1W2PP18 115 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 GRIFINA4D1Z8 144 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 FNDC10F2Z333 226 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 UQCRQO14949 82 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 LEPROTO15243 131 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 CXCL1P09341 107 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 PYYP10082 97 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 HLA-DRB4P13762 266 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 CRYBB3P26998 211 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 BRS3P32247 399 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 ARPP19P56211 112 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 TMEM258P61165 79 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 SP6Q3SY56 376 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 TMEM155Q4W5P6 130 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 EIF5AL1Q6IS14 154 aaKnown RBP2.54□□□□□ -2
SF3B1-205ENST00000424674 ZNF767PQ75MW2 155 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 SPATA12Q7Z6I5 190 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 HIST3H2BBQ8N257 126 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 RNF182Q8N6D2 247 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 C15orf56Q8N910 161 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 ELSPBP1Q96BH3 223 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 ZC2HC1AQ96GY0 325 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 PRELID3AQ96N28 172 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 CIB3Q96Q77 187 aaPredicted RBP2.54□□□□□ -2
SF3B1-205ENST00000424674 PLA2G2FQ9BZM2 168 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 GABARAPL1Q9H0R8 117 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 ZNRD1Q9P1U0 126 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 TMEM14AQ9Y6G1 99 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 HLA-DRB4X5D2U9 266 aa2.54□□□□□ -2
SF3B1-205ENST00000424674 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.54□□□□□ -2
SF3B1-205ENST00000424674 CCDC18Q5T9S5 1454 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 MYOM3Q5VTT5 1437 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 FAM236AA0A1B0GUQ0 79 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 FAM236BA0A1B0GV22 79 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 SPAARA0A1B0GVQ0 90 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 NDUFAF8A1L188 74 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 C7orf71A4D174 169 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 HRASP01112 189 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 TCRAP04437 139 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 SLC25A16P16260 332 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 DIAPH2-AS1Q14236 149 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 HIGD2BQ4VC39 106 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 LINC01545Q5VT33 79 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 NTM-AS1Q6ZSK4 140 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 MIR17HGQ75NE6 70 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 GTSCR1Q86UQ5 136 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 TEN1Q86WV5 123 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 ZNF101Q8IZC7 436 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 KCNRGQ8N5I3 272 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 POM121L12Q8N7R1 296 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 OR10P1Q8NGE3 313 aa2.53□□□□□ -2
SF3B1-205ENST00000424674 RHOXF1Q8NHV9 184 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms