RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 BPIFCQ8NFQ6 507 aa10.37□□□□□ -0.75
PRPF39-202ENST00000424478 EEF1AKMT3Q96AZ1 226 aa10.37□□□□□ -0.75
PRPF39-202ENST00000424478 WDR61Q9GZS3 305 aaKnown RBP10.37□□□□□ -0.75
PRPF39-202ENST00000424478 NPVFQ9HCQ7 196 aa10.37□□□□□ -0.75
PRPF39-202ENST00000424478 IGHV3-49A0A0A0MS15 119 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 CORTO00230 105 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 AGPAT2O15120 278 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 IGLC1P0CG04 106 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 HIST1H1BP16401 226 aaKnown RBP10.36□□□□□ -0.75
PRPF39-202ENST00000424478 ATP6V0CP27449 155 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 MFAP4P55083 255 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 WFDC12Q8WWY7 111 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 SLC25A32Q9H2D1 315 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 VSIRQ9H7M9 311 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 IGHV4OR15-8A0A075B7B6 117 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 IGHV3OR16-13A0A075B7E8 117 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 A0A087WW49 117 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 IGHV3-74A0A0B4J1X5 117 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 ELANEP08246 267 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 GPX4P36969 197 aaPredicted RBP10.36□□□□□ -0.75
PRPF39-202ENST00000424478 TEPPQ6URK8 271 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 ALKAL2Q6UX46 152 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 TMEM116Q8NCL8 245 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 TMED6Q8WW62 240 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 RCC1LQ96I51 464 aaKnown RBP10.36□□□□□ -0.75
PRPF39-202ENST00000424478 PLA2G2EQ9NZK7 142 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 WDR83OSQ9Y284 106 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 FAM223BA6NKX1 122 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 CYB5BO43169 146 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 CLN5O75503 358 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 CAMLGP49069 296 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 FAM223AQ8IWN6 122 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 OR1L6Q8NGR2 347 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 OR4X1Q8NH49 305 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 ZNF414Q96IQ9 312 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 PBDC1Q9BVG4 233 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 NPCDR1Q9BY65 106 aa10.36□□□□□ -0.75
PRPF39-202ENST00000424478 RPS10-NUDT3A0A1W2PQS6 291 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 BMPR1BO00238 502 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 LY86O95711 162 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 IFNA5P01569 189 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 SNRPCP09234 159 aaKnown RBP10.35□□□□□ -0.75
PRPF39-202ENST00000424478 ARL3P36405 182 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 VWC2Q2TAL6 325 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 TMEM144Q7Z5S9 345 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 CACNG8Q8WXS5 425 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 GGTLC1Q9BX51 225 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 LSM4Q9Y4Z0 139 aaKnown RBP10.35□□□□□ -0.75
PRPF39-202ENST00000424478 SLURP1P55000 103 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 UNQ9165/PRO28630Q6UXU0 137 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 SCGB1C1Q8TD33 95 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 CXorf58Q96LI9 332 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 MDFIQ99750 246 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 ZNF580Q9UK33 172 aa10.35□□□□□ -0.75
PRPF39-202ENST00000424478 PSG1P11464 419 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 FHITP49789 147 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 UHRF2Q96PU4 802 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 IGHV3-66A0A0C4DH42 116 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 HMGB3O15347 200 aaKnown RBP10.34□□□□□ -0.75
PRPF39-202ENST00000424478 NPBWR1P48145 328 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 FOXL1Q12952 345 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 ETFRF1Q6IPR1 90 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 ZNF343Q6P1L6 599 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 OR11H1Q8NG94 326 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 SPATA3Q8NHX4 192 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 MYOZ3Q8TDC0 251 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 VN1R17PQ8TDU5 208 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 ST8SIA2Q92186 375 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 C20orf24Q9BUV8 137 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 PUS1Q9Y606 427 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRPF39-202ENST00000424478 ZNF320A2RRD8 509 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 H3BUA1 57 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 TGOLN2O43493 480 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 DFFBO76075 338 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 ORM2P19652 201 aa10.34□□□□□ -0.75
PRPF39-202ENST00000424478 ATP5IP56385 69 aaPredicted RBP10.34□□□□□ -0.75
PRPF39-202ENST00000424478 A0A0G2JLM5 398 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 ADARB2-AS1A8MUL3 147 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 STPG3Q8N7X2 389 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 USMG5Q96IX5 58 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 UBE2E2Q96LR5 201 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 A0A1B0GV50 99 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 I3L521 148 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 NUPL2O15504 423 aaKnown RBP10.33□□□□□ -0.76
PRPF39-202ENST00000424478 LYZP61626 148 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 ZNF266Q14584 549 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 ATP6V1FQ16864 119 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 LEMD1Q68G75 181 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 RNF152Q8N8N0 203 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 PEF1Q9UBV8 284 aaKnown RBP10.33□□□□□ -0.76
PRPF39-202ENST00000424478 PXMP4Q9Y6I8 212 aa10.33□□□□□ -0.76
PRPF39-202ENST00000424478 TRBV7-1A0A0A6YYK4 115 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 BORCS7-ASMTA0A0B4J1R7 106 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 TMEM89A2RUT3 159 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 LGALS1P09382 135 aaKnown RBP10.32□□□□□ -0.76
PRPF39-202ENST00000424478 CYP2G1PQ6ZSU1 146 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 OR51G1Q8NGK1 321 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 RAX2Q96IS3 184 aa10.32□□□□□ -0.76
PRPF39-202ENST00000424478 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.32□□□□□ -0.76
PRPF39-202ENST00000424478 JTBO76095 146 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms