RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 M0R1B8 84 aa12.29□□□□□ -0.44
C9orf3-204ENST00000424143 CEACAM4O75871 244 aa12.29□□□□□ -0.44
C9orf3-204ENST00000424143 NTF3P20783 257 aa12.29□□□□□ -0.44
C9orf3-204ENST00000424143 GNG10P50151 68 aa12.29□□□□□ -0.44
C9orf3-204ENST00000424143 UBE2V1Q13404 147 aa12.29□□□□□ -0.44
C9orf3-204ENST00000424143 MORN5Q5VZ52 161 aa12.29□□□□□ -0.44
C9orf3-204ENST00000424143 OR4F17Q8NGA8 305 aa12.29□□□□□ -0.44
C9orf3-204ENST00000424143 OR10W1Q8NGF6 305 aa12.29□□□□□ -0.44
C9orf3-204ENST00000424143 CCL13Q99616 98 aa12.29□□□□□ -0.44
C9orf3-204ENST00000424143 NDFIP1Q9BT67 221 aa12.29□□□□□ -0.44
C9orf3-204ENST00000424143 TMEM70Q9BUB7 260 aa12.29□□□□□ -0.44
C9orf3-204ENST00000424143 MRPL20Q9BYC9 149 aaKnown RBP12.29□□□□□ -0.44
C9orf3-204ENST00000424143 KNTC1P50748 2209 aa12.28□□□□□ -0.44
C9orf3-204ENST00000424143 HIGD1CA8MV81 97 aa12.28□□□□□ -0.44
C9orf3-204ENST00000424143 TFPI2P48307 235 aa12.28□□□□□ -0.44
C9orf3-204ENST00000424143 CCL11P51671 97 aa12.28□□□□□ -0.44
C9orf3-204ENST00000424143 ZNF474Q6S9Z5 364 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-204ENST00000424143 C5orf17Q8NAS9 161 aa12.28□□□□□ -0.44
C9orf3-204ENST00000424143 RPP21Q9H633 154 aaKnown RBP12.28□□□□□ -0.44
C9orf3-204ENST00000424143 FNDC4Q9H6D8 234 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-204ENST00000424143 TNCP24821 2201 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 SPEGQ15772 3267 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 CGB1A6NKQ9 187 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 NPIPB6E9PJ23 425 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 CA1P00915 261 aaPredicted RBP12.27□□□□□ -0.44
C9orf3-204ENST00000424143 COL8A2P25067 703 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 MC5RP33032 325 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 LGALS7P47929 136 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 WT1-ASQ06250 92 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 GATD1Q8NB37 220 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 NPIPB3Q92617 1050 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 ST6GALNAC6Q969X2 333 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 SSBP3Q9BWW4 388 aaPredicted RBP12.27□□□□□ -0.44
C9orf3-204ENST00000424143 WNT10AQ9GZT5 417 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.44
C9orf3-204ENST00000424143 DYSFO75923 2080 aa12.27□□□□□ -0.45
C9orf3-204ENST00000424143 INTS1Q8N201 2190 aaKnown RBP12.27□□□□□ -0.45
C9orf3-204ENST00000424143 LTAP01374 205 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 IGLV2-23P01705 113 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 PYYP10082 97 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 IGLL1P15814 213 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 TNFRSF1AP19438 455 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 FOXA3P55318 350 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-204ENST00000424143 FAM201AQ5SY85 155 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 FAM120AOSQ5T036 256 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 C16orf54Q6UWD8 224 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 LINC00479Q96M42 142 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 ASCL3Q9NQ33 180 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 WASHC3Q9Y3C0 194 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 PRR14LQ5THK1 2151 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 TCF21O43680 179 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 HLA-DRB1P01911 266 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 VMA21Q3ZAQ7 101 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 DUX4L9Q6RFH8 374 aaPredicted RBP12.26□□□□□ -0.45
C9orf3-204ENST00000424143 RBPMS2Q6ZRY4 209 aaKnown RBP12.26□□□□□ -0.45
C9orf3-204ENST00000424143 SSX8Q7RTT4 187 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 FAM216BQ8N7L0 139 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 RBMXL3Q8N7X1 1067 aaKnown RBP12.26□□□□□ -0.45
C9orf3-204ENST00000424143 TMEM116Q8NCL8 245 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 URB1-AS1Q96HZ7 61 aa12.26□□□□□ -0.45
C9orf3-204ENST00000424143 EYSQ5T1H1 3165 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 VWC2LB2RUY7 222 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 CORTO00230 105 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 NKX2-8O15522 239 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 SLC25A5P05141 298 aaKnown RBP12.25□□□□□ -0.45
C9orf3-204ENST00000424143 NBEAP1P0C6P0 100 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 PTTG1IPP53801 180 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 LRRC10Q5BKY1 277 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 LCN12Q6JVE5 192 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 IGF2-ASQ6U949 168 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 PET117Q6UWS5 81 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 ZNF841Q6ZN19 808 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 LINC00305Q7Z4B0 112 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 TEX45Q8NA69 505 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 MS4A6AQ9H2W1 248 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 TMEM14CQ9P0S9 112 aa12.25□□□□□ -0.45
C9orf3-204ENST00000424143 PCNX2A6NKB5 2137 aa12.24□□□□□ -0.45
C9orf3-204ENST00000424143 RAI1Q7Z5J4 1906 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-204ENST00000424143 IGHV2-70DA0A0C4DH43 119 aa12.24□□□□□ -0.45
C9orf3-204ENST00000424143 HAX1O00165 279 aa12.24□□□□□ -0.45
C9orf3-204ENST00000424143 TNFRSF13BO14836 293 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-204ENST00000424143 CCL25O15444 150 aa12.24□□□□□ -0.45
C9orf3-204ENST00000424143 RNASEKQ6P5S7 137 aaKnown RBP12.24□□□□□ -0.45
C9orf3-204ENST00000424143 IGFL3Q6UXB1 125 aa12.24□□□□□ -0.45
C9orf3-204ENST00000424143 C22orf15Q8WYQ4 148 aa12.24□□□□□ -0.45
C9orf3-204ENST00000424143 TRAV34A0A0B4J273 112 aa12.23□□□□□ -0.45
C9orf3-204ENST00000424143 A0A1B0GW15 77 aa12.23□□□□□ -0.45
C9orf3-204ENST00000424143 PGPA6NDG6 321 aa12.23□□□□□ -0.45
C9orf3-204ENST00000424143 SYS1-DBNDD2H3BUS1 97 aa12.23□□□□□ -0.45
C9orf3-204ENST00000424143 M0R296 226 aa12.23□□□□□ -0.45
C9orf3-204ENST00000424143 MOSP00540 346 aa12.23□□□□□ -0.45
C9orf3-204ENST00000424143 LIPFP07098 398 aa12.23□□□□□ -0.45
C9orf3-204ENST00000424143 HOXB4P17483 251 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-204ENST00000424143 SSBP2P81877 361 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-204ENST00000424143 Q56UQ5 140 aa12.23□□□□□ -0.45
C9orf3-204ENST00000424143 C1orf185Q5T7R7 199 aa12.23□□□□□ -0.45
C9orf3-204ENST00000424143 GUCD1Q96NT3 240 aa12.23□□□□□ -0.45
C9orf3-204ENST00000424143 OTORQ9NRC9 128 aa12.23□□□□□ -0.45
C9orf3-204ENST00000424143 TRAV30A0A087WSZ9 112 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms