RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 LRRC37A5PQ49AS3 106 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 NMSQ5H8A3 153 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 SLC25A30Q5SVS4 291 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 FAM120AOSQ5T036 256 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 C22orf39Q6P5X5 142 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 KCTD18Q6PI47 426 aaPredicted RBP2.22□□□□□ -2.05
PMS1-209ENST00000424059 SLC25A34Q6PIV7 304 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 UNQ9165/PRO28630Q6UXU0 137 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 DGAT2L6Q6ZPD8 337 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 SLC25A42Q86VD7 318 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 TMEM256Q8N2U0 113 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 NEXN-AS1Q8NBZ9 246 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 LY6G5BQ8NDX9 201 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 OR51H1Q8NH63 302 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 TAF15Q92804 592 aaKnown RBP eCLIP2.22□□□□□ -2.05
PMS1-209ENST00000424059 LSM10Q969L4 123 aaKnown RBP2.22□□□□□ -2.05
PMS1-209ENST00000424059 ZNF689Q96CS4 500 aaPredicted RBP2.22□□□□□ -2.05
PMS1-209ENST00000424059 AQP10Q96PS8 301 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 PMCHL2Q9BQD1 86 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 SDF2L1Q9HCN8 221 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 RABAC1Q9UI14 185 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 PCTPQ9UKL6 214 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 ZNF256Q9Y2P7 627 aaPredicted RBP2.22□□□□□ -2.05
PMS1-209ENST00000424059 ANKRD31Q8N7Z5 1873 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 ADGRL1O94910 1474 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 NUP188Q5SRE5 1749 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 FMN2Q9NZ56 1722 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 CLTCQ00610 1675 aaKnown RBP2.22□□□□□ -2.05
PMS1-209ENST00000424059 AHDC1Q5TGY3 1603 aaPredicted RBP2.22□□□□□ -2.05
PMS1-209ENST00000424059 IGHV4OR15-8A0A075B7B6 117 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 TRAV13-1A0A0B4J241 112 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 LOC285095A0A1B0GVY8 99 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 RBAKDNA6NC62 111 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 FAM72CH0Y354 149 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 J3QT63 122 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 TNFSF12O43508 249 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 ZNF253O75346 499 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 NGFP01138 241 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 PTHP01270 115 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 GP1BBP13224 206 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 PTGDSP41222 190 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 RPL34P49207 117 aaKnown RBP2.22□□□□□ -2.05
PMS1-209ENST00000424059 FKBP1AP62942 108 aaKnown RBP2.22□□□□□ -2.05
PMS1-209ENST00000424059 ARL16Q0P5N6 197 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 MSMO1Q15800 293 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 RTL8BQ17RB0 113 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 Q56UQ5 140 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 PAPPA-AS1Q5QFB9 102 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 FAM72AQ5TYM5 149 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 FAM72DQ6L9T8 149 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 Q75L30 129 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 FAM72BQ86X60 149 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 ZNF101Q8IZC7 436 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 SLC22A24Q8N4F4 322 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 OR5H2Q8NGV7 314 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 OR10AC1Q8NH08 325 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 C18orf15Q96N68 181 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 TM2D3Q9BRN9 247 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 RHNO1Q9BSD3 238 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 RTL8AQ9BWD3 113 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 GABARAPL1Q9H0R8 117 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 NAA60Q9H7X0 242 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 PLEKHF2Q9H8W4 249 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 SIX2Q9NPC8 291 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 FIS1Q9Y3D6 152 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 LAMB1P07942 1786 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 SCN1AP35498 2009 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 SCN9AQ15858 1988 aa2.22□□□□□ -2.05
PMS1-209ENST00000424059 PDCD11Q14690 1871 aaKnown RBP2.21□□□□□ -2.06
PMS1-209ENST00000424059 USP32Q8NFA0 1604 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 ITGB4P16144 1822 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 NUP205Q92621 2012 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 SIPA1L3O60292 1781 aaPredicted RBP2.21□□□□□ -2.06
PMS1-209ENST00000424059 SCN10AQ9Y5Y9 1956 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 MON2Q7Z3U7 1717 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 TICRRQ7Z2Z1 1910 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 TRAV12-2A0A075B6T6 113 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 TRBV6-7A0A0A0MS04 114 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 DPRXA6NFQ7 191 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 PRAC2D3DTV9 90 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 C17orf112F2Z3M2 114 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 LINC01619G3V211 115 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 DEDDO75618 318 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 SNCGO76070 127 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 APOMO95445 188 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 TRACP01848 142 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 RBP4P02753 201 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 HSPB1P04792 205 aaKnown RBP2.21□□□□□ -2.06
PMS1-209ENST00000424059 LGALS2P05162 132 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 ZNF688P0C7X2 276 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 ZNF286BP0CG31 522 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 PYYP10082 97 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 IGLL1P15814 213 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 TMEM30BQ3MIR4 351 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 ZNF322Q6U7Q0 402 aaPredicted RBP2.21□□□□□ -2.06
PMS1-209ENST00000424059 TOMM5Q8N4H5 51 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 PPDPFLQ8WWR9 84 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 NABP1Q96AH0 204 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 OVOL2Q9BRP0 275 aa2.21□□□□□ -2.06
PMS1-209ENST00000424059 SHANK2-AS3Q9BTD1 123 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms