RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 FLVCR2Q9UPI3 526 aa8.23□□□□□ -1.09
USP49-204ENST00000423567 PUS1Q9Y606 427 aaKnown RBP eCLIP8.23□□□□□ -1.09
USP49-204ENST00000423567 OR4C46A6NHA9 309 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 A6NHS1 94 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 TSPAN4O14817 238 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 PITX3O75364 302 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 CD5P06127 495 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 ANXA7P20073 488 aaKnown RBP8.22□□□□□ -1.09
USP49-204ENST00000423567 BTCP35070 178 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 RND2P52198 227 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 RAB11AP62491 216 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 DHRS2Q13268 280 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 MLANAQ16655 118 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 GGNBP1Q5YKI7 109 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 PRSS54Q6PEW0 395 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 NARS2Q96I59 477 aaKnown RBP8.22□□□□□ -1.09
USP49-204ENST00000423567 WWC2-AS2Q96NR7 200 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 C20orf85Q9H1P6 137 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 TMEM231Q9H6L2 316 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 SRD5A3Q9H8P0 318 aa8.22□□□□□ -1.09
USP49-204ENST00000423567 PAIP2BQ9ULR5 123 aaKnown RBP8.22□□□□□ -1.09
USP49-204ENST00000423567 A0A1W2PS18 150 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 WRBO00258 174 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 CHEK1O14757 476 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 IAPPP10997 89 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 NPPCP23582 126 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 OR10J1P30954 320 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 TIGITQ495A1 244 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 MZT2BQ6NZ67 158 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 DEFB125Q8N687 156 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 Q8WTZ3 238 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 ACY3Q96HD9 319 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 SLC35E1Q96K37 410 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 RCHY1Q96PM5 261 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 METTL26Q96S19 204 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 SPATA25Q9BR10 227 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 WDR12Q9GZL7 423 aaKnown RBP8.21□□□□□ -1.1
USP49-204ENST00000423567 BATF3Q9NR55 127 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 PTTG2Q9NZH5 202 aa8.21□□□□□ -1.1
USP49-204ENST00000423567 MRPL36Q9P0J6 103 aaKnown RBP8.21□□□□□ -1.1
USP49-204ENST00000423567 IGHV3OR16-13A0A075B7E8 117 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 IGHV3-49A0A0A0MS15 119 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 IGHV3-74A0A0B4J1X5 117 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 FAM240BA0A1B0GVZ2 78 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 PLA2G10O15496 165 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 SYNGR2O43760 224 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 ADAP1O75689 374 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 TCRBP04435 133 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 GPX4P36969 197 aaPredicted RBP8.2□□□□□ -1.1
USP49-204ENST00000423567 PAFAH1B2P68402 229 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 ZNF846Q147U1 533 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 HAGHQ16775 308 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 TMEM170AQ8WVE7 144 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 GRAMD2BQ96HH9 432 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 RNF2Q99496 336 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 MAGT1Q9H0U3 335 aa8.2□□□□□ -1.1
USP49-204ENST00000423567 TRAV6A0A075B6T7 132 aa8.19□□□□□ -1.1
USP49-204ENST00000423567 IGKV1-17P01599 117 aa8.19□□□□□ -1.1
USP49-204ENST00000423567 FABP1P07148 127 aa8.19□□□□□ -1.1
USP49-204ENST00000423567 IGLC1P0CG04 106 aa8.19□□□□□ -1.1
USP49-204ENST00000423567 NKX2-1P43699 371 aaPredicted RBP8.19□□□□□ -1.1
USP49-204ENST00000423567 CMC4P56277 68 aaPredicted RBP8.19□□□□□ -1.1
USP49-204ENST00000423567 YPEL3P61236 119 aaPredicted RBP8.19□□□□□ -1.1
USP49-204ENST00000423567 RPL11P62913 178 aaKnown RBP8.19□□□□□ -1.1
USP49-204ENST00000423567 TCF24Q7RTU0 167 aa8.19□□□□□ -1.1
USP49-204ENST00000423567 NPIPB3Q92617 1050 aa8.19□□□□□ -1.1
USP49-204ENST00000423567 TM2D3Q9BRN9 247 aa8.19□□□□□ -1.1
USP49-204ENST00000423567 WFDC10AQ9H1F0 79 aa8.19□□□□□ -1.1
USP49-204ENST00000423567 NUDT15Q9NV35 164 aa8.19□□□□□ -1.1
USP49-204ENST00000423567 DNAH9Q9NYC9 4486 aa8.19□□□□□ -1.1
USP49-204ENST00000423567 IGKV3-7A0A075B6H7 116 aa8.18□□□□□ -1.1
USP49-204ENST00000423567 ZFP92A6NM28 416 aa8.18□□□□□ -1.1
USP49-204ENST00000423567 DNASE2O00115 360 aaPredicted RBP8.18□□□□□ -1.1
USP49-204ENST00000423567 RD3LP0DJH9 198 aa8.18□□□□□ -1.1
USP49-204ENST00000423567 TFPI2P48307 235 aa8.18□□□□□ -1.1
USP49-204ENST00000423567 EIF2B2P49770 351 aaKnown RBP8.18□□□□□ -1.1
USP49-204ENST00000423567 IAH1Q2TAA2 248 aaPredicted RBP8.18□□□□□ -1.1
USP49-204ENST00000423567 MITD1Q8WV92 249 aa8.18□□□□□ -1.1
USP49-204ENST00000423567 ST8SIA2Q92186 375 aa8.18□□□□□ -1.1
USP49-204ENST00000423567 ZNF414Q96IQ9 312 aa8.18□□□□□ -1.1
USP49-204ENST00000423567 VSIRQ9H7M9 311 aa8.18□□□□□ -1.1
USP49-204ENST00000423567 UBQLN2Q9UHD9 624 aa8.18□□□□□ -1.1
USP49-204ENST00000423567 STRAPQ9Y3F4 350 aaKnown RBP8.18□□□□□ -1.1
USP49-204ENST00000423567 LOC102724200A0A096LPH7 203 aaPredicted RBP8.17□□□□□ -1.1
USP49-204ENST00000423567 IGHV3-66A0A0C4DH42 116 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 DFFBO76075 338 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 SCGB1D2O95969 90 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 TOMM40O96008 361 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 IL4P05112 153 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 HNRNPCP07910 306 aaKnown RBP eCLIP8.17□□□□□ -1.1
USP49-204ENST00000423567 H2AFB2P0C5Z0 115 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 CRYBB3P26998 211 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 ID3Q02535 119 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 ASAH1Q13510 395 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 GAMTQ14353 236 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 SPANXN5Q5MJ07 72 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 ENKURQ8TC29 256 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 FAM110AQ9BQ89 295 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 GGTLC1Q9BX51 225 aa8.17□□□□□ -1.1
USP49-204ENST00000423567 GSKIPQ9P0R6 139 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms