RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 NUPL2O15504 423 aaKnown RBP13.01□□□□□ -0.33
COL7A1-202ENST00000422991 IGLC1P0CG04 106 aa13.01□□□□□ -0.33
COL7A1-202ENST00000422991 EWSR1Q01844 656 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL7A1-202ENST00000422991 SLC38A11Q08AI6 406 aa13.01□□□□□ -0.33
COL7A1-202ENST00000422991 SLC25A31Q9H0C2 315 aa13.01□□□□□ -0.33
COL7A1-202ENST00000422991 TRAV30A0A087WSZ9 112 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 IGHV3-35A0A0C4DH35 117 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 A0A1B0GVG6 124 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 FNDC10F2Z333 226 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 SCGB2A1O75556 95 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 IGKV1-17P01599 117 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 OR10J1P30954 320 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 SYNJ2BPP57105 145 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 GPHB5Q86YW7 130 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 C1QL4Q86Z23 238 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 OR1S2Q8NGQ3 325 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 GGACTQ9BVM4 153 aa13□□□□□ -0.33
COL7A1-202ENST00000422991 OVOL1O14753 267 aa12.99□□□□□ -0.33
COL7A1-202ENST00000422991 AKR1C1Q04828 323 aa12.99□□□□□ -0.33
COL7A1-202ENST00000422991 RELQ04864 619 aaPredicted RBP12.99□□□□□ -0.33
COL7A1-202ENST00000422991 BAXQ07812 192 aa12.99□□□□□ -0.33
COL7A1-202ENST00000422991 TIGITQ495A1 244 aa12.99□□□□□ -0.33
COL7A1-202ENST00000422991 REC114Q7Z4M0 266 aa12.99□□□□□ -0.33
COL7A1-202ENST00000422991 TMEM217Q8N7C4 229 aa12.99□□□□□ -0.33
COL7A1-202ENST00000422991 THAP8Q8NA92 274 aa12.99□□□□□ -0.33
COL7A1-202ENST00000422991 WFDC9Q8NEX5 89 aa12.99□□□□□ -0.33
COL7A1-202ENST00000422991 IGKV1D-37A0A075B6S9 117 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 IGKV1OR2-108A0A075B7D4 117 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 SMCO3A2RU48 225 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 LGALS9O00182 355 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 NDUFA4O00483 81 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 CD33P20138 364 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 RPL12P30050 165 aaKnown RBP12.98□□□□□ -0.33
COL7A1-202ENST00000422991 S100A11P31949 105 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 HBG1P69891 147 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 HBG2P69892 147 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 NHLH2Q02577 135 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 FAM106AQ4KMX7 169 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 TMEM144Q7Z5S9 345 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 TMEM190Q8WZ59 177 aa12.98□□□□□ -0.33
COL7A1-202ENST00000422991 MEGF8Q7Z7M0 2845 aa12.97□□□□□ -0.33
COL7A1-202ENST00000422991 A8MWP6 167 aa12.97□□□□□ -0.33
COL7A1-202ENST00000422991 YPEL3P61236 119 aaPredicted RBP12.97□□□□□ -0.33
COL7A1-202ENST00000422991 VWC2Q2TAL6 325 aa12.97□□□□□ -0.33
COL7A1-202ENST00000422991 UNQ9165/PRO28630Q6UXU0 137 aa12.97□□□□□ -0.33
COL7A1-202ENST00000422991 ZNF600Q6ZNG1 722 aa12.97□□□□□ -0.33
COL7A1-202ENST00000422991 LILRB2Q8N423 598 aa12.97□□□□□ -0.33
COL7A1-202ENST00000422991 ST6GAL2Q96JF0 529 aa12.97□□□□□ -0.33
COL7A1-202ENST00000422991 TRGV9Q99603 122 aa12.97□□□□□ -0.33
COL7A1-202ENST00000422991 HSPB11Q9Y547 144 aa12.97□□□□□ -0.33
COL7A1-202ENST00000422991 FXYD6-FXYD2A0A087WZ82 144 aa12.96□□□□□ -0.33
COL7A1-202ENST00000422991 ZFP92A6NM28 416 aa12.96□□□□□ -0.33
COL7A1-202ENST00000422991 SMLR1H3BR10 107 aa12.96□□□□□ -0.33
COL7A1-202ENST00000422991 OR9G4Q8NGQ1 327 aa12.96□□□□□ -0.33
COL7A1-202ENST00000422991 OR5C1Q8NGR4 320 aa12.96□□□□□ -0.33
COL7A1-202ENST00000422991 RCC1LQ96I51 464 aaKnown RBP12.96□□□□□ -0.33
COL7A1-202ENST00000422991 TMEM147Q9BVK8 224 aa12.96□□□□□ -0.33
COL7A1-202ENST00000422991 ZFAND3Q9H8U3 227 aa12.96□□□□□ -0.33
COL7A1-202ENST00000422991 NPVFQ9HCQ7 196 aa12.96□□□□□ -0.33
COL7A1-202ENST00000422991 UQCC1Q9NVA1 299 aa12.96□□□□□ -0.33
COL7A1-202ENST00000422991 PUS1Q9Y606 427 aaKnown RBP eCLIP12.96□□□□□ -0.33
COL7A1-202ENST00000422991 NOTCH3Q9UM47 2321 aa12.96□□□□□ -0.34
COL7A1-202ENST00000422991 ZNF320A2RRD8 509 aa12.95□□□□□ -0.34
COL7A1-202ENST00000422991 TOMM40O96008 361 aa12.95□□□□□ -0.34
COL7A1-202ENST00000422991 ATP6V1FQ16864 119 aa12.95□□□□□ -0.34
COL7A1-202ENST00000422991 TOMM20LQ6UXN7 152 aa12.95□□□□□ -0.34
COL7A1-202ENST00000422991 AQP10Q96PS8 301 aa12.95□□□□□ -0.34
COL7A1-202ENST00000422991 LSM4Q9Y4Z0 139 aaKnown RBP12.95□□□□□ -0.34
COL7A1-202ENST00000422991 NOTCH1P46531 2555 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 IGHV3OR16-8A0A075B7F1 116 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 UBE2L5PA0A1B0GUS4 154 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 TMEM213A2RRL7 107 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 ZNF90Q03938 601 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 CLINT1Q14677 625 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 IL34Q6ZMJ4 242 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 ZNF546Q86UE3 836 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 AKAP14Q86UN6 197 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 TCTE3Q8IZS6 198 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 MCRIP2Q9BUT9 160 aaKnown RBP12.94□□□□□ -0.34
COL7A1-202ENST00000422991 PEMTQ9UBM1 199 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 TNFSF18Q9UNG2 199 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 UFC1Q9Y3C8 167 aa12.94□□□□□ -0.34
COL7A1-202ENST00000422991 RNF222A6NCQ9 220 aa12.93□□□□□ -0.34
COL7A1-202ENST00000422991 SEC14L6B5MCN3 397 aa12.93□□□□□ -0.34
COL7A1-202ENST00000422991 YIF1AO95070 293 aa12.93□□□□□ -0.34
COL7A1-202ENST00000422991 FABP1P07148 127 aa12.93□□□□□ -0.34
COL7A1-202ENST00000422991 RD3LP0DJH9 198 aa12.93□□□□□ -0.34
COL7A1-202ENST00000422991 PSG1P11464 419 aa12.93□□□□□ -0.34
COL7A1-202ENST00000422991 NUP62P37198 522 aaPredicted RBP12.93□□□□□ -0.34
COL7A1-202ENST00000422991 ELLP55199 621 aaPredicted RBP12.93□□□□□ -0.34
COL7A1-202ENST00000422991 TM4SF20Q53R12 229 aa12.93□□□□□ -0.34
COL7A1-202ENST00000422991 TEPPQ6URK8 271 aa12.93□□□□□ -0.34
COL7A1-202ENST00000422991 C20orf24Q9BUV8 137 aa12.93□□□□□ -0.34
COL7A1-202ENST00000422991 ELOVL1Q9BW60 279 aa12.93□□□□□ -0.34
COL7A1-202ENST00000422991 DAZ1Q9NQZ3 744 aaKnown RBP12.93□□□□□ -0.34
COL7A1-202ENST00000422991 WDR83OSQ9Y284 106 aa12.93□□□□□ -0.34
COL7A1-202ENST00000422991 C2orf70A6NJV1 201 aa12.92□□□□□ -0.34
COL7A1-202ENST00000422991 K7EMT4 169 aa12.92□□□□□ -0.34
COL7A1-202ENST00000422991 CSN3P07498 182 aa12.92□□□□□ -0.34
COL7A1-202ENST00000422991 IGLL1P15814 213 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms