RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 WDR73Q6P4I2 378 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 CACNG8Q8WXS5 425 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 MRPL32Q9BYC8 188 aaKnown RBP12.74□□□□□ -0.37
CDH1-202ENST00000422392 NRN1Q9NPD7 142 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 Q9UFV3 132 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 IGLV2-23P01705 113 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 HCP5Q6MZN7 132 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 NUP37Q8NFH4 326 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 FAM57AQ8TBR7 257 aa12.74□□□□□ -0.37
CDH1-202ENST00000422392 ASH1LQ9NR48 2969 aaKnown RBP12.73□□□□□ -0.37
CDH1-202ENST00000422392 PPIAL4EA0A075B759 164 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 A6NNC1 897 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 PPIAL4DF5H284 164 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 MT-ND6P03923 174 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 PPIAL4FP0DN26 164 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 Q8N976 141 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 BLNKQ8WV28 456 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 CTSZQ9UBR2 303 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 PPIAL4AQ9Y536 164 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 A0A1W2PPI3 338 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 CORTO00230 105 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 ORM2P19652 201 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 TMEM183BQ1AE95 376 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 LINC00305Q7Z4B0 112 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 ZNF329Q86UD4 541 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 TMEM167AQ8TBQ9 72 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 KCNS1Q96KK3 526 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 RPH3ALQ9UNE2 315 aa12.73□□□□□ -0.37
CDH1-202ENST00000422392 TCRBV4S1A1TA0A5B7 111 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 DIRC3C9JPN6 131 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 ENSAO43768 121 aaKnown RBP12.72□□□□□ -0.37
CDH1-202ENST00000422392 THBDP07204 575 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 ATP5IP56385 69 aaPredicted RBP12.72□□□□□ -0.37
CDH1-202ENST00000422392 MEF2CQ06413 473 aaPredicted RBP12.72□□□□□ -0.37
CDH1-202ENST00000422392 BATFQ16520 125 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 TMEM30BQ3MIR4 351 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 C20orf144Q9BQM9 153 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 TMEM178BH3BS89 294 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 H3BTX0 84 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 FSTL3O95633 263 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 NTF3P20783 257 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 FXYD5Q96DB9 178 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 TMEM68Q96MH6 324 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 MIEN1Q9BRT3 115 aa12.72□□□□□ -0.37
CDH1-202ENST00000422392 A0A1W2PN81 502 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 IZUMO1RA6ND01 250 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 C22orf46C9J442 243 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 C16orf97H3BN30 126 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 PEX7O00628 323 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 APCSP02743 223 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 MFAP2P55001 183 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 RPL19P84098 196 aaKnown RBP12.71□□□□□ -0.37
CDH1-202ENST00000422392 OR10J3Q5JRS4 329 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 GDF5OSQ5U4N7 250 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 ZNF841Q6ZN19 808 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 NUDT10Q8NFP7 164 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 NUDT11Q96G61 164 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 SSBP4Q9BWG4 385 aaPredicted RBP12.71□□□□□ -0.37
CDH1-202ENST00000422392 ZNF586Q9NXT0 402 aa12.71□□□□□ -0.37
CDH1-202ENST00000422392 KLK10O43240 276 aa12.71□□□□□ -0.38
CDH1-202ENST00000422392 HLA-DQA1P01909 254 aa12.71□□□□□ -0.38
CDH1-202ENST00000422392 CNTFRP26992 372 aa12.71□□□□□ -0.38
CDH1-202ENST00000422392 ZNF331Q9NQX6 463 aaPredicted RBP12.71□□□□□ -0.38
CDH1-202ENST00000422392 NDUFB3O43676 98 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 CRYABP02511 175 aaKnown RBP12.7□□□□□ -0.38
CDH1-202ENST00000422392 GPR6P46095 362 aaPredicted RBP12.7□□□□□ -0.38
CDH1-202ENST00000422392 CASP6P55212 293 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 MRGPRG-AS1Q2M3A8 158 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 PDPNQ86YL7 162 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 NUP35Q8NFH5 326 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 OR1B1Q8NGR6 318 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 ST6GALNAC6Q969X2 333 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 WNT10AQ9GZT5 417 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 WASHC3Q9Y3C0 194 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 ZNF324O75467 553 aaPredicted RBP12.7□□□□□ -0.38
CDH1-202ENST00000422392 LOXP28300 417 aaPredicted RBP12.7□□□□□ -0.38
CDH1-202ENST00000422392 ZNF124Q15973 351 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 LEMD1Q68G75 181 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 VSTM2AQ8TAG5 236 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 TSKUQ8WUA8 353 aa12.7□□□□□ -0.38
CDH1-202ENST00000422392 GSX1Q9H4S2 264 aaPredicted RBP12.7□□□□□ -0.38
CDH1-202ENST00000422392 ZNF25P17030 456 aaPredicted RBP12.69□□□□□ -0.38
CDH1-202ENST00000422392 CAMPP49913 170 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 BPIFB3P59826 476 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 LRRC10Q5BKY1 277 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 NIT1Q86X76 327 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 OR1L4Q8NGR5 311 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 C18orf32Q8TCD1 76 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 TMEM186Q96B77 213 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 RNF2Q99496 336 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 ARHGAP32A7KAX9 2087 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 ABCA4P78363 2273 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 CEP295Q9C0D2 2601 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 VWC2LB2RUY7 222 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 C3orf79P0CE67 100 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 ATOH7Q8N100 152 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 MBD6Q96DN6 1003 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
CDH1-202ENST00000422392 SUB1P53999 127 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDH1-202ENST00000422392 TBR1Q16650 682 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms