RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 LCN12Q6JVE5 192 aa11.95□□□□□ -0.5
BRAT1-202ENST00000421712 ADAMTSL5Q6ZMM2 481 aa11.95□□□□□ -0.5
BRAT1-202ENST00000421712 OR1S2Q8NGQ3 325 aa11.95□□□□□ -0.5
BRAT1-202ENST00000421712 MARC2Q969Z3 335 aa11.95□□□□□ -0.5
BRAT1-202ENST00000421712 SMIM8Q96KF7 97 aa11.95□□□□□ -0.5
BRAT1-202ENST00000421712 DAZ1Q9NQZ3 744 aaKnown RBP11.95□□□□□ -0.5
BRAT1-202ENST00000421712 TECRQ9NZ01 308 aaKnown RBP11.95□□□□□ -0.5
BRAT1-202ENST00000421712 MRPL27Q9P0M9 148 aaKnown RBP11.95□□□□□ -0.5
BRAT1-202ENST00000421712 RCL1Q9Y2P8 373 aaKnown RBP11.95□□□□□ -0.5
BRAT1-202ENST00000421712 PUS1Q9Y606 427 aaKnown RBP eCLIP11.95□□□□□ -0.5
BRAT1-202ENST00000421712 SIX6O95475 246 aa11.94□□□□□ -0.5
BRAT1-202ENST00000421712 DEFB114Q30KQ6 69 aa11.94□□□□□ -0.5
BRAT1-202ENST00000421712 TOMM20LQ6UXN7 152 aa11.94□□□□□ -0.5
BRAT1-202ENST00000421712 TMEM116Q8NCL8 245 aa11.94□□□□□ -0.5
BRAT1-202ENST00000421712 GINS3Q9BRX5 216 aa11.94□□□□□ -0.5
BRAT1-202ENST00000421712 IGHV3-49A0A0A0MS15 119 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 TRAV14DV4A0A0A6YYC5 116 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 ZFP92A6NM28 416 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 K7EIL1 84 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 K7EMT4 169 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 K7EPK0 472 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 PVALBP20472 110 aaPredicted RBP11.93□□□□□ -0.5
BRAT1-202ENST00000421712 BCAP31P51572 246 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 GAMTQ14353 236 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 GUCA2BQ16661 112 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 OR8G2PQ6IF36 304 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 BTNL8Q6UX41 500 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 OR2K2Q8NGT1 345 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 Q8WTZ3 238 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 MLXQ9UH92 298 aa11.93□□□□□ -0.5
BRAT1-202ENST00000421712 IZUMO1RA6ND01 250 aa11.92□□□□□ -0.5
BRAT1-202ENST00000421712 IGKV1-17P01599 117 aa11.92□□□□□ -0.5
BRAT1-202ENST00000421712 METTL15P1P0C7V9 234 aa11.92□□□□□ -0.5
BRAT1-202ENST00000421712 IGLC1P0CG04 106 aa11.92□□□□□ -0.5
BRAT1-202ENST00000421712 C8orf88P0DMB2 117 aa11.92□□□□□ -0.5
BRAT1-202ENST00000421712 PAX9P55771 341 aa11.92□□□□□ -0.5
BRAT1-202ENST00000421712 TAS2R30P59541 319 aa11.92□□□□□ -0.5
BRAT1-202ENST00000421712 RBPMS2Q6ZRY4 209 aaKnown RBP11.92□□□□□ -0.5
BRAT1-202ENST00000421712 SMCO3A2RU48 225 aa11.91□□□□□ -0.5
BRAT1-202ENST00000421712 C7orf66A4D0T2 115 aa11.91□□□□□ -0.5
BRAT1-202ENST00000421712 TSC22D2O75157 780 aa11.91□□□□□ -0.5
BRAT1-202ENST00000421712 SCAF4O95104 1147 aaKnown RBP11.91□□□□□ -0.5
BRAT1-202ENST00000421712 RD3LP0DJH9 198 aa11.91□□□□□ -0.5
BRAT1-202ENST00000421712 YPEL3P61236 119 aaPredicted RBP11.91□□□□□ -0.5
BRAT1-202ENST00000421712 RAB32Q13637 225 aa11.91□□□□□ -0.5
BRAT1-202ENST00000421712 RGS21Q2M5E4 152 aa11.91□□□□□ -0.5
BRAT1-202ENST00000421712 OR10P1Q8NGE3 313 aa11.91□□□□□ -0.5
BRAT1-202ENST00000421712 MGAT4CQ9UBM8 478 aa11.91□□□□□ -0.5
BRAT1-202ENST00000421712 SMPXQ9UHP9 88 aa11.91□□□□□ -0.5
BRAT1-202ENST00000421712 IGHV3OR16-13A0A075B7E8 117 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 IGHV3-74A0A0B4J1X5 117 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 IGHV7-4-1A0A0J9YVY3 117 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 RLN2P04090 185 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 NPPCP23582 126 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 BMI1P35226 326 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 CAV2P51636 162 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 AKR1C1Q04828 323 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 LAMTOR1Q6IAA8 161 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 GTSCR1Q86UQ5 136 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 WDR89Q96FK6 387 aaPredicted RBP11.9□□□□□ -0.5
BRAT1-202ENST00000421712 ZNF414Q96IQ9 312 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 METTL26Q96S19 204 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 RHPN1-AS1Q9BWJ2 59 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 ZFAND3Q9H8U3 227 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 ALG5Q9Y673 324 aa11.9□□□□□ -0.5
BRAT1-202ENST00000421712 CCNKO75909 580 aa11.89□□□□□ -0.51
BRAT1-202ENST00000421712 TOMM40O96008 361 aa11.89□□□□□ -0.51
BRAT1-202ENST00000421712 FABP1P07148 127 aa11.89□□□□□ -0.51
BRAT1-202ENST00000421712 RRAS2P62070 204 aaPredicted RBP11.89□□□□□ -0.51
BRAT1-202ENST00000421712 CYCSP99999 105 aaKnown RBP11.89□□□□□ -0.51
BRAT1-202ENST00000421712 LRRC37A5PQ49AS3 106 aa11.89□□□□□ -0.51
BRAT1-202ENST00000421712 TMEM14EPQ6UXP3 125 aa11.89□□□□□ -0.51
BRAT1-202ENST00000421712 ACOT7LQ6ZUV0 252 aa11.89□□□□□ -0.51
BRAT1-202ENST00000421712 TMEM61Q8N0U2 210 aa11.89□□□□□ -0.51
BRAT1-202ENST00000421712 NARS2Q96I59 477 aaKnown RBP11.89□□□□□ -0.51
BRAT1-202ENST00000421712 NMES1Q9C002 83 aa11.89□□□□□ -0.51
BRAT1-202ENST00000421712 IGHV3-66A0A0C4DH42 116 aa11.88□□□□□ -0.51
BRAT1-202ENST00000421712 ZNF785A8K8V0 405 aa11.88□□□□□ -0.51
BRAT1-202ENST00000421712 PRSS46E5RG02 174 aa11.88□□□□□ -0.51
BRAT1-202ENST00000421712 CHEK1O14757 476 aa11.88□□□□□ -0.51
BRAT1-202ENST00000421712 IL4P05112 153 aa11.88□□□□□ -0.51
BRAT1-202ENST00000421712 OR2F1Q13607 317 aa11.88□□□□□ -0.51
BRAT1-202ENST00000421712 SMAD5-AS1Q9Y6J3 95 aa11.88□□□□□ -0.51
BRAT1-202ENST00000421712 MEGF8Q7Z7M0 2845 aa11.88□□□□□ -0.51
BRAT1-202ENST00000421712 TRAV25A0A0B4J276 109 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 A0A1W2PS18 150 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 FAM24AA6NFZ4 105 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 PMS2P5A8MQ11 134 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 PSG1P11464 419 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 CD81P60033 236 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 RPL11P62913 178 aaKnown RBP11.87□□□□□ -0.51
BRAT1-202ENST00000421712 ZNF90Q03938 601 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 IL15RAQ13261 267 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 OR51G1Q8NGK1 321 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 RNF2Q99496 336 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 TRGV9Q99603 122 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 PBDC1Q9BVG4 233 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 MED28Q9H204 178 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 TMEM231Q9H6L2 316 aa11.87□□□□□ -0.51
BRAT1-202ENST00000421712 IGKV3-7A0A075B6H7 116 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms