RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 SELENOTP62341 195 aa16.71■□□□□ 0.27
ABCF3-202ENST00000421340 ZNF343Q6P1L6 599 aa16.71■□□□□ 0.27
ABCF3-202ENST00000421340 ZNF709Q8N972 641 aa16.71■□□□□ 0.27
ABCF3-202ENST00000421340 HSD17B11Q8NBQ5 300 aa16.71■□□□□ 0.27
ABCF3-202ENST00000421340 KCNIP2Q9NS61 270 aa16.71■□□□□ 0.27
ABCF3-202ENST00000421340 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.7■□□□□ 0.26
ABCF3-202ENST00000421340 TCRBV4S1A1TA0A5B7 111 aa16.7■□□□□ 0.26
ABCF3-202ENST00000421340 ZFP92A6NM28 416 aa16.7■□□□□ 0.26
ABCF3-202ENST00000421340 AGPAT2O15120 278 aa16.7■□□□□ 0.26
ABCF3-202ENST00000421340 GNG7O60262 68 aa16.7■□□□□ 0.26
ABCF3-202ENST00000421340 FABP1P07148 127 aa16.7■□□□□ 0.26
ABCF3-202ENST00000421340 RPL29P47914 159 aaKnown RBP16.7■□□□□ 0.26
ABCF3-202ENST00000421340 SERF2P84101 59 aa16.7■□□□□ 0.26
ABCF3-202ENST00000421340 Q56UQ5 140 aa16.7■□□□□ 0.26
ABCF3-202ENST00000421340 SPSB3Q6PJ21 355 aa16.7■□□□□ 0.26
ABCF3-202ENST00000421340 SLC45A2Q9UMX9 530 aa16.7■□□□□ 0.26
ABCF3-202ENST00000421340 RPLP1P05386 114 aaKnown RBP16.69■□□□□ 0.26
ABCF3-202ENST00000421340 CLEC3BP05452 202 aa16.69■□□□□ 0.26
ABCF3-202ENST00000421340 CTSGP08311 255 aa16.69■□□□□ 0.26
ABCF3-202ENST00000421340 YPEL3P61236 119 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-202ENST00000421340 DEFA5Q01523 94 aa16.69■□□□□ 0.26
ABCF3-202ENST00000421340 FOXL1Q12952 345 aa16.69■□□□□ 0.26
ABCF3-202ENST00000421340 TEX261Q6UWH6 196 aa16.69■□□□□ 0.26
ABCF3-202ENST00000421340 OR2G3Q8NGZ4 309 aa16.69■□□□□ 0.26
ABCF3-202ENST00000421340 CCDC140Q96MF4 163 aa16.69■□□□□ 0.26
ABCF3-202ENST00000421340 GGTLC1Q9BX51 225 aa16.69■□□□□ 0.26
ABCF3-202ENST00000421340 IGKV1-17P01599 117 aa16.68■□□□□ 0.26
ABCF3-202ENST00000421340 CDX1P47902 265 aaPredicted RBP16.68■□□□□ 0.26
ABCF3-202ENST00000421340 SRSF2Q01130 221 aaKnown RBP16.68■□□□□ 0.26
ABCF3-202ENST00000421340 RUNX1Q01196 453 aa16.68■□□□□ 0.26
ABCF3-202ENST00000421340 CYP2G1PQ6ZSU1 146 aa16.68■□□□□ 0.26
ABCF3-202ENST00000421340 RSG1Q9BU20 258 aa16.68■□□□□ 0.26
ABCF3-202ENST00000421340 S4R3C0 116 aa16.68■□□□□ 0.26
ABCF3-202ENST00000421340 NUPL2O15504 423 aaKnown RBP16.67■□□□□ 0.26
ABCF3-202ENST00000421340 CFDP00746 253 aaPredicted RBP16.67■□□□□ 0.26
ABCF3-202ENST00000421340 PRR20EP86478 221 aa16.67■□□□□ 0.26
ABCF3-202ENST00000421340 PRR20CP86479 221 aa16.67■□□□□ 0.26
ABCF3-202ENST00000421340 PRR20DP86480 221 aa16.67■□□□□ 0.26
ABCF3-202ENST00000421340 PRR20BP86481 221 aa16.67■□□□□ 0.26
ABCF3-202ENST00000421340 PRR20AP86496 221 aa16.67■□□□□ 0.26
ABCF3-202ENST00000421340 TCTEX1D4Q5JR98 221 aa16.67■□□□□ 0.26
ABCF3-202ENST00000421340 LCNL1Q6ZST4 164 aa16.67■□□□□ 0.26
ABCF3-202ENST00000421340 SLC25A32Q9H2D1 315 aa16.67■□□□□ 0.26
ABCF3-202ENST00000421340 TGOLN2O43493 480 aa16.66■□□□□ 0.26
ABCF3-202ENST00000421340 IGHV3-23P01764 117 aa16.66■□□□□ 0.26
ABCF3-202ENST00000421340 CLEC19AQ6UXS0 136 aa16.66■□□□□ 0.26
ABCF3-202ENST00000421340 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.66■□□□□ 0.26
ABCF3-202ENST00000421340 OR2T8A6NH00 312 aa16.65■□□□□ 0.26
ABCF3-202ENST00000421340 TOMM40O96008 361 aa16.65■□□□□ 0.26
ABCF3-202ENST00000421340 IFNA7P01567 189 aa16.65■□□□□ 0.26
ABCF3-202ENST00000421340 LINC00869P0C866 280 aa16.65■□□□□ 0.26
ABCF3-202ENST00000421340 GPR183P32249 361 aa16.65■□□□□ 0.26
ABCF3-202ENST00000421340 ADMP35318 185 aa16.65■□□□□ 0.26
ABCF3-202ENST00000421340 ZNF90Q03938 601 aa16.65■□□□□ 0.26
ABCF3-202ENST00000421340 TIGITQ495A1 244 aa16.65■□□□□ 0.26
ABCF3-202ENST00000421340 ZNF680Q8NEM1 530 aa16.65■□□□□ 0.26
ABCF3-202ENST00000421340 SH3BGRL3Q9H299 93 aa16.65■□□□□ 0.26
ABCF3-202ENST00000421340 PEF1Q9UBV8 284 aaKnown RBP16.65■□□□□ 0.26
ABCF3-202ENST00000421340 CUBNO60494 3623 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 UMAD1C9J7I0 102 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 TSPAN15O95858 294 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 IGHV3-11P01762 117 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 MBP02144 154 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 LGALS1P09382 135 aaKnown RBP16.64■□□□□ 0.25
ABCF3-202ENST00000421340 RD3LP0DJH9 198 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 IFITM2Q01629 132 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 PXDC1Q5TGL8 231 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 STPG3Q8N7X2 389 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 BPIFCQ8NFQ6 507 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 Q8WTZ3 238 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 TMED6Q8WW62 240 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 CHRDL1Q9BU40 450 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 SLC39A9Q9NUM3 307 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 PXMP4Q9Y6I8 212 aa16.64■□□□□ 0.25
ABCF3-202ENST00000421340 HAX1O00165 279 aa16.63■□□□□ 0.25
ABCF3-202ENST00000421340 RAB5CP51148 216 aa16.63■□□□□ 0.25
ABCF3-202ENST00000421340 PLP1P60201 277 aa16.63■□□□□ 0.25
ABCF3-202ENST00000421340 B2MP61769 119 aa16.63■□□□□ 0.25
ABCF3-202ENST00000421340 RELQ04864 619 aaPredicted RBP16.63■□□□□ 0.25
ABCF3-202ENST00000421340 ZNF616Q08AN1 781 aa16.63■□□□□ 0.25
ABCF3-202ENST00000421340 MIC13Q5XKP0 118 aa16.63■□□□□ 0.25
ABCF3-202ENST00000421340 Q6ZRG5 221 aa16.63■□□□□ 0.25
ABCF3-202ENST00000421340 GNB4Q9HAV0 340 aa16.63■□□□□ 0.25
ABCF3-202ENST00000421340 I3L521 148 aa16.62■□□□□ 0.25
ABCF3-202ENST00000421340 CD28P10747 220 aa16.62■□□□□ 0.25
ABCF3-202ENST00000421340 PSG1P11464 419 aa16.62■□□□□ 0.25
ABCF3-202ENST00000421340 ARL3P36405 182 aa16.62■□□□□ 0.25
ABCF3-202ENST00000421340 ZNF600Q6ZNG1 722 aa16.62■□□□□ 0.25
ABCF3-202ENST00000421340 TMEM182Q6ZP80 229 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-202ENST00000421340 ZNF767PQ75MW2 155 aa16.62■□□□□ 0.25
ABCF3-202ENST00000421340 OR51G1Q8NGK1 321 aa16.62■□□□□ 0.25
ABCF3-202ENST00000421340 C4orf3Q8WVX3 66 aa16.62■□□□□ 0.25
ABCF3-202ENST00000421340 C19orf24Q9BVV8 132 aa16.62■□□□□ 0.25
ABCF3-202ENST00000421340 TSSC4Q9Y5U2 329 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-202ENST00000421340 RFNGQ9Y644 331 aa16.62■□□□□ 0.25
ABCF3-202ENST00000421340 GGCTO75223 188 aaKnown RBP16.61■□□□□ 0.25
ABCF3-202ENST00000421340 OR2C1O95371 312 aa16.61■□□□□ 0.25
ABCF3-202ENST00000421340 SULT1A2P50226 295 aa16.61■□□□□ 0.25
ABCF3-202ENST00000421340 ACOT6Q3I5F7 207 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-202ENST00000421340 FFAR4Q5NUL3 377 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms