RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 SHPKQ9UHJ6 478 aa5.7□□□□□ -1.5
AC012560.1-202ENST00000421324 U3KQK5 164 aa5.7□□□□□ -1.5
AC012560.1-202ENST00000421324 A0A1B0GU03 582 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 LINC00854A0A1B0GVQ3 168 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 RPS10-NUDT3A0A1W2PQS6 291 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 C15orf62A8K5M9 175 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 SCAF4O95104 1147 aaKnown RBP5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 EDN2P20800 178 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 OPRK1P41145 380 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 CD81P60033 236 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 FHL2Q14192 279 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 SMCO1Q147U7 214 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 RBMS2Q15434 407 aaKnown RBP5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 BAK1Q16611 211 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 BTNL8Q6UX41 500 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 TMEM61Q8N0U2 210 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 CENPSQ8N2Z9 138 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 OR52B4Q8NGK2 314 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 OR1S1Q8NH92 325 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 NEURL2Q9BR09 285 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 MLXQ9UH92 298 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 SELENOKQ9Y6D0 94 aa5.69□□□□□ -1.5
AC012560.1-202ENST00000421324 IGHV3OR16-8A0A075B7F1 116 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 TRAV30A0A087WSZ9 112 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 TRAV14DV4A0A0A6YYC5 116 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 DUXBA0A1W2PPF3 345 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 OR11H12B2RN74 326 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 ZNF207O43670 478 aaKnown RBP5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 NXPH3O95157 252 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 SFT2D2O95562 160 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 TMEM50AO95807 157 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 IFNA10P01566 189 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 CD7P09564 240 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 BMI1P35226 326 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 ATP5IP56385 69 aaPredicted RBP5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 UBE2MP61081 183 aaKnown RBP5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 TNFRSF9Q07011 255 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 BSXQ3C1V8 233 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 C2orf83Q53S99 150 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 NMSQ5H8A3 153 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 PVRIGQ6DKI7 326 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 ETFRF1Q6IPR1 90 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 LRTM2Q8N967 370 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 TMEM116Q8NCL8 245 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 SLC24A4Q8NFF2 622 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 RNASEH2CQ8TDP1 164 aaKnown RBP5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 ST8SIA2Q92186 375 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 C7orf50Q9BRJ6 194 aaKnown RBP5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 GINS3Q9BRX5 216 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 HSPB7Q9UBY9 170 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 SMPXQ9UHP9 88 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 U3KQ87 197 aa5.68□□□□□ -1.5
AC012560.1-202ENST00000421324 IGHV7-4-1A0A0J9YVY3 117 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 TSPAN4O14817 238 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 CLN5O75503 358 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 NDUFB6O95139 128 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 CD5P06127 495 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 SLC25A4P12235 298 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 SLC25A6P12236 298 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 IL7P13232 177 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 NPY1RP25929 384 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 PPP1R1AQ13522 171 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 CNPY1Q3B7I2 92 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 TOMM20LQ6UXN7 152 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 ZNF600Q6ZNG1 722 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 DEFB125Q8N687 156 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 OR4X1Q8NH49 305 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 DTD1Q8TEA8 209 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 OR10C1Q96KK4 312 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 SDHCQ99643 169 aaPredicted RBP5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 SPAG8Q99932 426 aaPredicted RBP5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 RHPN1-AS1Q9BWJ2 59 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 RBKSQ9H477 322 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 FNDC4Q9H6D8 234 aaPredicted RBP5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 TMED3Q9Y3Q3 217 aa5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 PUS1Q9Y606 427 aaKnown RBP eCLIP5.67□□□□□ -1.5
AC012560.1-202ENST00000421324 C9orf170A2RU37 121 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 OR4C46A6NHA9 309 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 CHEK1O14757 476 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 MED6O75586 246 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 IFNA21P01568 189 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 IFNA4P05014 189 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 HOXB5P09067 269 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 NPPCP23582 126 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 CMC4P56277 68 aaPredicted RBP5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 PAFAH1B2P68402 229 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 RPP30P78346 268 aaKnown RBP5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 HAGHQ16775 308 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 C4orf46Q504U0 113 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 LINC00299Q6ZSB3 139 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 COQ8AQ8NI60 647 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 Q8WTZ3 238 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 NARS2Q96I59 477 aaKnown RBP5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 RCHY1Q96PM5 261 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 TMEM231Q9H6L2 316 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 SRD5A3Q9H8P0 318 aa5.66□□□□□ -1.5
AC012560.1-202ENST00000421324 PRKDCP78527 4128 aaKnown RBP5.65□□□□□ -1.5
AC012560.1-202ENST00000421324 IGHV3OR16-13A0A075B7E8 117 aa5.65□□□□□ -1.5
AC012560.1-202ENST00000421324 IGHV3-49A0A0A0MS15 119 aa5.65□□□□□ -1.5
AC012560.1-202ENST00000421324 IGHV3-74A0A0B4J1X5 117 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms