RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 F11RQ9Y624 299 aaKnown RBP12.14□□□□□ -0.47
AP000550.1-201ENST00000420508 RNF151Q2KHN1 245 aa12.14□□□□□ -0.47
AP000550.1-201ENST00000420508 TMEM249Q2WGJ8 235 aa12.14□□□□□ -0.47
AP000550.1-201ENST00000420508 TMEM136Q6ZRR5 245 aa12.14□□□□□ -0.47
AP000550.1-201ENST00000420508 PRELID3AQ96N28 172 aa12.14□□□□□ -0.47
AP000550.1-201ENST00000420508 LOC389332A0A1B0GUA5 103 aa12.14□□□□□ -0.47
AP000550.1-201ENST00000420508 TIMM23O14925 209 aa12.14□□□□□ -0.47
AP000550.1-201ENST00000420508 SCGB1C2P0DMR2 95 aa12.14□□□□□ -0.47
AP000550.1-201ENST00000420508 GATA2P23769 480 aaPredicted RBP12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 PAX9P55771 341 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 ORMDL3Q8N138 153 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 C8orf31Q8N9H6 132 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 FABP5P3A8MUU1 101 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 RNASE2P10153 161 aaKnown RBP12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 POU2AF1Q16633 256 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 ACTL10Q5JWF8 245 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 LYPD6BQ8NI32 183 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 IGHV3-48P01763 117 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 FAM53AQ6NSI3 398 aaPredicted RBP12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 TMEM131Q92545 1883 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 TFF1P04155 84 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 ADMP35318 185 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 FER1L6-AS1Q8NA97 138 aa12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 PHF3Q92576 2039 aaKnown RBP12.13□□□□□ -0.47
AP000550.1-201ENST00000420508 NTF4P34130 210 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 DLX1P56177 255 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 CACNG7P62955 275 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 MSRB2Q9Y3D2 182 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 CXCL1P09341 107 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 ZNF833PQ6ZTB9 187 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 RAX2Q96IS3 184 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 PSG8Q9UQ74 426 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 BUB1B-PAK6H3BSN5 160 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 ASIPP42127 132 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 SGK494Q96LW2 274 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 LIME1Q9H400 295 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 WDR86Q86TI4 376 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 NDUFAF3Q9BU61 184 aa12.12□□□□□ -0.47
AP000550.1-201ENST00000420508 NUDT3O95989 172 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 SNRPCP09234 159 aaKnown RBP12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 GCSAMLQ5JQS6 135 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 F2Z2F3 143 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 H7C1H1 209 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 GPR183P32249 361 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 HIST1H2BLQ99880 126 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 SLX1AQ9BQ83 275 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 PRDM13Q9H4Q3 707 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 SERF1AO75920 110 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 SELLP14151 372 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 FAM159AQ6UWV7 190 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 Q6ZR03 302 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 MIEN1Q9BRT3 115 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 ZNF324O75467 553 aaPredicted RBP12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 MYOD1P15172 320 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 SIGLEC9Q9Y336 463 aa12.11□□□□□ -0.47
AP000550.1-201ENST00000420508 C15orf65H3BRN8 121 aa12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 H3BTX0 84 aa12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 K7ENP7 123 aa12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 COPS9Q8WXC6 57 aa12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 NEU1Q99519 415 aa12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 KIR2DL4Q99706 377 aa12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 RNASE7Q9H1E1 156 aaKnown RBP12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 VDAC2P45880 294 aaPredicted RBP12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 SRSF9Q13242 221 aaKnown RBP eCLIP12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 ZNF414Q96IQ9 312 aa12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 RAXQ9Y2V3 346 aa12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 OR5AN1Q8NGI8 311 aa12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 NRN1Q9NPD7 142 aa12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 MOB4Q9Y3A3 225 aa12.1□□□□□ -0.47
AP000550.1-201ENST00000420508 PYYP10082 97 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 CENPVQ7Z7K6 275 aaPredicted RBP12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 WFDC3Q8IUB2 231 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 OR10W1Q8NGF6 305 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 TRAV3A0A0B4J244 114 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 CBY3A6NI87 242 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 K7ERU9 68 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 CEACAM4O75871 244 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 NMUP48645 174 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 PDE6HQ13956 83 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 SEPSECSQ9HD40 501 aaKnown RBP12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 TRBV20OR9-2A0A075B6H5 130 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 C5orf64Q2M2E5 130 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 NEUROG1Q92886 237 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 J3KRW8 73 aa12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 MRPL27Q9P0M9 148 aaKnown RBP12.09□□□□□ -0.47
AP000550.1-201ENST00000420508 ZNF503-AS2A6NEH8 195 aa12.08□□□□□ -0.47
AP000550.1-201ENST00000420508 OVOL1O14753 267 aa12.08□□□□□ -0.47
AP000550.1-201ENST00000420508 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.47
AP000550.1-201ENST00000420508 IGKV1-39P01597 117 aa12.08□□□□□ -0.47
AP000550.1-201ENST00000420508 IGKV1D-39P04432 117 aa12.08□□□□□ -0.47
AP000550.1-201ENST00000420508 GFRA4Q9GZZ7 299 aa12.08□□□□□ -0.47
AP000550.1-201ENST00000420508 KAAG1Q9UBP8 84 aa12.08□□□□□ -0.47
AP000550.1-201ENST00000420508 DNAJC13O75165 2243 aa12.08□□□□□ -0.48
AP000550.1-201ENST00000420508 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
AP000550.1-201ENST00000420508 TOMM40O96008 361 aa12.08□□□□□ -0.48
AP000550.1-201ENST00000420508 APOHP02749 345 aaPredicted RBP12.08□□□□□ -0.48
AP000550.1-201ENST00000420508 PRTN3P24158 256 aa12.08□□□□□ -0.48
AP000550.1-201ENST00000420508 NXT2Q9NPJ8 142 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms