RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 LAMTOR1Q6IAA8 161 aa13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 SLC16A13Q7RTY0 426 aa13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 TMEM61Q8N0U2 210 aa13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 Q8N1Y9 231 aa13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 WDR89Q96FK6 387 aaPredicted RBP13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 PAIP2BQ9ULR5 123 aaKnown RBP13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 PUS1Q9Y606 427 aaKnown RBP eCLIP13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 IGHV7-4-1A0A0J9YVY3 117 aa13.7□□□□□ -0.22
ECHDC3-202ENST00000420401 C12orf45Q8N5I9 185 aaPredicted RBP13.7□□□□□ -0.22
ECHDC3-202ENST00000420401 OR4D5Q8NGN0 318 aa13.7□□□□□ -0.22
ECHDC3-202ENST00000420401 NPIPB3Q92617 1050 aa13.7□□□□□ -0.22
ECHDC3-202ENST00000420401 ACY3Q96HD9 319 aa13.7□□□□□ -0.22
ECHDC3-202ENST00000420401 ZNF414Q96IQ9 312 aa13.7□□□□□ -0.22
ECHDC3-202ENST00000420401 SEC22CQ9BRL7 303 aa13.7□□□□□ -0.22
ECHDC3-202ENST00000420401 SMPXQ9UHP9 88 aa13.7□□□□□ -0.22
ECHDC3-202ENST00000420401 SELENOKQ9Y6D0 94 aa13.7□□□□□ -0.22
ECHDC3-202ENST00000420401 OR10J1P30954 320 aa13.69□□□□□ -0.22
ECHDC3-202ENST00000420401 BMI1P35226 326 aa13.69□□□□□ -0.22
ECHDC3-202ENST00000420401 CD81P60033 236 aa13.69□□□□□ -0.22
ECHDC3-202ENST00000420401 TIGITQ495A1 244 aa13.69□□□□□ -0.22
ECHDC3-202ENST00000420401 SLC35E1Q96K37 410 aa13.69□□□□□ -0.22
ECHDC3-202ENST00000420401 GSKIPQ9P0R6 139 aa13.69□□□□□ -0.22
ECHDC3-202ENST00000420401 A8MZ25 164 aa13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 SCAF4O95104 1147 aaKnown RBP13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 IGKV1-17P01599 117 aa13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 IL5P05113 134 aa13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 IGLC1P0CG04 106 aa13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 YPEL3P61236 119 aaPredicted RBP13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 POLR2GP62487 172 aaKnown RBP eCLIP13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 SPANXN5Q5MJ07 72 aa13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 NRARPQ7Z6K4 114 aa13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 ZBTB8BQ8NAP8 495 aaPredicted RBP13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 Q8WTZ3 238 aa13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 NEURL2Q9BR09 285 aa13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 RHPN1-AS1Q9BWJ2 59 aa13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 ZFAND3Q9H8U3 227 aa13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 GPN1Q9HCN4 374 aaPredicted RBP13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 STRAPQ9Y3F4 350 aaKnown RBP13.68□□□□□ -0.22
ECHDC3-202ENST00000420401 FAM25EA8MYX2 175 aa13.67□□□□□ -0.22
ECHDC3-202ENST00000420401 CHEK1O14757 476 aa13.67□□□□□ -0.22
ECHDC3-202ENST00000420401 SSSCA1O60232 199 aa13.67□□□□□ -0.22
ECHDC3-202ENST00000420401 SCGB1D2O95969 90 aa13.67□□□□□ -0.22
ECHDC3-202ENST00000420401 FRMD6-AS1P0C7T7 363 aa13.67□□□□□ -0.22
ECHDC3-202ENST00000420401 IGHV4-30-4P0DP06 118 aa13.67□□□□□ -0.22
ECHDC3-202ENST00000420401 SPAG8Q99932 426 aaPredicted RBP13.67□□□□□ -0.22
ECHDC3-202ENST00000420401 TUBA4BQ9H853 241 aa13.67□□□□□ -0.22
ECHDC3-202ENST00000420401 TENM2Q9NT68 2774 aa13.67□□□□□ -0.22
ECHDC3-202ENST00000420401 STAB2Q8WWQ8 2551 aa13.67□□□□□ -0.22
ECHDC3-202ENST00000420401 TSPAN4O14817 238 aa13.66□□□□□ -0.22
ECHDC3-202ENST00000420401 CD5P06127 495 aa13.66□□□□□ -0.22
ECHDC3-202ENST00000420401 NPPCP23582 126 aa13.66□□□□□ -0.22
ECHDC3-202ENST00000420401 GAMTQ14353 236 aa13.66□□□□□ -0.22
ECHDC3-202ENST00000420401 CASC10Q5T4H9 136 aa13.66□□□□□ -0.22
ECHDC3-202ENST00000420401 SMIM8Q96KF7 97 aa13.66□□□□□ -0.22
ECHDC3-202ENST00000420401 METTL26Q96S19 204 aa13.66□□□□□ -0.22
ECHDC3-202ENST00000420401 RAB40CQ96S21 281 aa13.66□□□□□ -0.22
ECHDC3-202ENST00000420401 ASCL2Q99929 193 aa13.66□□□□□ -0.22
ECHDC3-202ENST00000420401 PSENENQ9NZ42 101 aa13.66□□□□□ -0.22
ECHDC3-202ENST00000420401 IGHV3-49A0A0A0MS15 119 aa13.65□□□□□ -0.22
ECHDC3-202ENST00000420401 C5orf51A6NDU8 294 aa13.65□□□□□ -0.22
ECHDC3-202ENST00000420401 CCSO14618 274 aa13.65□□□□□ -0.22
ECHDC3-202ENST00000420401 RD3LP0DJH9 198 aa13.65□□□□□ -0.22
ECHDC3-202ENST00000420401 MUC7Q8TAX7 377 aa13.65□□□□□ -0.22
ECHDC3-202ENST00000420401 NARS2Q96I59 477 aaKnown RBP13.65□□□□□ -0.22
ECHDC3-202ENST00000420401 RNF2Q99496 336 aa13.65□□□□□ -0.22
ECHDC3-202ENST00000420401 TMEM231Q9H6L2 316 aa13.65□□□□□ -0.22
ECHDC3-202ENST00000420401 C19orf73Q9NVV2 129 aa13.65□□□□□ -0.22
ECHDC3-202ENST00000420401 IGHV3OR16-13A0A075B7E8 117 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 IGHV3-74A0A0B4J1X5 117 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 A0A1W2PS18 150 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 ZFP92A6NM28 416 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 INMT-MINDY4F8WBC2 141 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 H3BP45 60 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 PRAF2O60831 178 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 TOMM40O96008 361 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 FABP1P07148 127 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 CD7P09564 240 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 TAS2R30P59541 319 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 VSIRQ9H7M9 311 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 RYR2Q92736 4967 aa13.64□□□□□ -0.23
ECHDC3-202ENST00000420401 DYNC2H1Q8NCM8 4307 aaKnown RBP13.63□□□□□ -0.23
ECHDC3-202ENST00000420401 EPPK1P58107 5090 aaKnown RBP13.63□□□□□ -0.23
ECHDC3-202ENST00000420401 OR4C46A6NHA9 309 aa13.63□□□□□ -0.23
ECHDC3-202ENST00000420401 SNRPGP15A8MWD9 76 aa13.63□□□□□ -0.23
ECHDC3-202ENST00000420401 OR11H12B2RN74 326 aa13.63□□□□□ -0.23
ECHDC3-202ENST00000420401 MBPP02686 304 aaPredicted RBP13.63□□□□□ -0.23
ECHDC3-202ENST00000420401 GSG1LQ6UXU4 331 aa13.63□□□□□ -0.23
ECHDC3-202ENST00000420401 C2orf50Q96LR7 162 aa13.63□□□□□ -0.23
ECHDC3-202ENST00000420401 MARVELD1Q9BSK0 173 aa13.63□□□□□ -0.23
ECHDC3-202ENST00000420401 TSC22D2O75157 780 aa13.62□□□□□ -0.23
ECHDC3-202ENST00000420401 APOHP02749 345 aaPredicted RBP13.62□□□□□ -0.23
ECHDC3-202ENST00000420401 CRYBB3P26998 211 aa13.62□□□□□ -0.23
ECHDC3-202ENST00000420401 ST8SIA2Q92186 375 aa13.62□□□□□ -0.23
ECHDC3-202ENST00000420401 GRAMD2BQ96HH9 432 aa13.62□□□□□ -0.23
ECHDC3-202ENST00000420401 IGHV3-66A0A0C4DH42 116 aa13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 PRSS46E5RG02 174 aa13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 L7N2F9 121 aa13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 IL4P05112 153 aa13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 PSG1P11464 419 aa13.61□□□□□ -0.23
ECHDC3-202ENST00000420401 PAX9P55771 341 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms