RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 FLYWCH2Q96CP2 140 aaKnown RBP12.3□□□□□ -0.44
SEMA3B-203ENST00000419007 BET1LQ9NYM9 111 aa12.3□□□□□ -0.44
SEMA3B-203ENST00000419007 DIAPH2-AS1Q14236 149 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 Q56UQ5 140 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 UQCR10Q9UDW1 63 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 PEX7O00628 323 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 HYPMO75409 117 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 PRRX1P54821 245 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 TNXAQ16473 311 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 NUP35Q8NFH5 326 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 NUDT10Q8NFP7 164 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 NUDT11Q96G61 164 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 MRPL32Q9BYC8 188 aaKnown RBP12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 FNDC4Q9H6D8 234 aaPredicted RBP12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 NCOR2Q9Y618 2525 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 IGHV3-21A0A0B4J1V1 117 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 H3BTX0 84 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 CORTO00230 105 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 UBE2G1P62253 170 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 OR2D3Q8NGH3 330 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 FAM222BQ8WU58 562 aa12.29□□□□□ -0.44
SEMA3B-203ENST00000419007 CHD8Q9HCK8 2581 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 IGLV3-9A0A075B6K5 115 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 M0R2Z0 102 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 MOSP00540 346 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 WT1-ASQ06250 92 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 CLEC7AQ9BXN2 247 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 NDUFA4L2Q9NRX3 87 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 HIGD1CA8MV81 97 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 IGLC2P0DOY2 106 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 IGLC3P0DOY3 106 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 TBR1Q16650 682 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 SPACA3Q8IXA5 215 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 FAM169BQ8N8A8 192 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 OSR1Q8TAX0 266 aaPredicted RBP12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 A0A1W2PN81 502 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 MBD3L4A6NDZ8 208 aaPredicted RBP12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 MBD3L3A6NE82 208 aaPredicted RBP12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 MBD3L5A6NJ08 208 aaPredicted RBP12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 SIAH2O43255 324 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 SLC25A5P05141 298 aaKnown RBP12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 HCP5Q6MZN7 132 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 LINC00305Q7Z4B0 112 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 PIP4P1Q86T03 277 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 OR1B1Q8NGR6 318 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 MBD3L2Q8NHZ7 208 aaPredicted RBP12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 CACNG8Q8WXS5 425 aa12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 ZNF430Q9H8G1 570 aaPredicted RBP12.28□□□□□ -0.44
SEMA3B-203ENST00000419007 IGF2RP11717 2491 aa12.27□□□□□ -0.44
SEMA3B-203ENST00000419007 IGHV3-72A0A0B4J1Y9 119 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 H0YJW9 148 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 ENSAO43768 121 aaKnown RBP12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 CTRLP40313 264 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 GATA4P43694 442 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 GDF5OSQ5U4N7 250 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 PATE2Q6UY27 113 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 MRPL52Q86TS9 123 aaKnown RBP12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 ZNF329Q86UD4 541 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 STPG4Q8N801 248 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 GAL3ST2Q9H3Q3 398 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 SAP30LQ9HAJ7 183 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 MRPL36Q9P0J6 103 aaKnown RBP12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 NKX6-3A6NJ46 265 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 TM4SF5O14894 197 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 TCF21O43680 179 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 HINT1P49773 126 aaPredicted RBP12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 ANKRD39Q53RE8 183 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 ZADH2Q8N4Q0 377 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 NCOR1P1Q9H4R4 102 aa12.27□□□□□ -0.45
SEMA3B-203ENST00000419007 SLC25A17O43808 307 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 CD24P25063 80 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 OR1L4Q8NGR5 311 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 LAMTOR2Q9Y2Q5 125 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 FOXA3P55318 350 aaPredicted RBP12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 C19orf35Q6ZS72 473 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 TCF24Q7RTU0 167 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 PDPNQ86YL7 162 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 PNKDQ8N490 385 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 ZNF714Q96N38 554 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 FAM215AQ9Y5M1 114 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 LINC00312Q9Y6C7 94 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 ZGRF1Q86YA3 2104 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 PSMB11A5LHX3 300 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 PGPA6NDG6 321 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 ATP5IP56385 69 aaPredicted RBP12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 PMCHL1Q16048 86 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 IGFL2Q6UWQ7 119 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 KLHDC1Q8N7A1 406 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 CCL17Q92583 94 aa12.26□□□□□ -0.45
SEMA3B-203ENST00000419007 SUB1P53999 127 aaKnown RBP eCLIP12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 ZNF833PQ6ZTB9 187 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 Q6ZVH6 145 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 GRAMD2BQ96HH9 432 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 TPSG1Q9NRR2 321 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 TACC2O95359 2948 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 KALRNO60229 2985 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 TCRBV4S1A1TA0A5B7 111 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 M0QZ24 198 aa12.25□□□□□ -0.45
SEMA3B-203ENST00000419007 TOX4O94842 621 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms