RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 FCN3O75636 299 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 MYOD1P15172 320 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 GNG4P50150 75 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 SSTP61278 116 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 LINC00305Q7Z4B0 112 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 DAZAP1Q96EP5 407 aaKnown RBP6.69□□□□□ -1.34
USP54-203ENST00000418501 NPFFR1Q9GZQ6 430 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 PIEZO2Q9H5I5 2752 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 SERTM2A0A1B0GWG4 89 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 A0A1W2PS18 150 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 UTF1Q5T230 341 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 SAMD13Q5VXD3 122 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 RAI1Q7Z5J4 1906 aaPredicted RBP6.69□□□□□ -1.34
USP54-203ENST00000418501 PRSS22Q9GZN4 317 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 HCFC1P51610 2035 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 HELTA6NFD8 242 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 SMIM6P0DI80 62 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 CD99P14209 185 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 CNTFRP26992 372 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 TAS2R60P59551 318 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 PLP1P60201 277 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 GUCA2BQ16661 112 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 Q8N6K4 173 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 ELOVL1Q9BW60 279 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 TMEM242Q9NWH2 141 aa6.69□□□□□ -1.34
USP54-203ENST00000418501 EYSQ5T1H1 3165 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 TEX22C9J3V5 150 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 GALR1P47211 349 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 OR5T1Q8NG75 326 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 TPSG1Q9NRR2 321 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 COL6A3P12111 3177 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 CACNA1AO00555 2505 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 SLC25A5P05141 298 aaKnown RBP6.68□□□□□ -1.34
USP54-203ENST00000418501 CCL20P78556 96 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 C1orf159Q96HA4 380 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 METTL26Q96S19 204 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 NDUFB8O95169 186 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 AKR1D1P51857 326 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 LYPD1Q8N2G4 141 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 NDFIP1Q9BT67 221 aa6.68□□□□□ -1.34
USP54-203ENST00000418501 OR2J3O76001 311 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 HIST1H1EP10412 219 aaKnown RBP6.67□□□□□ -1.34
USP54-203ENST00000418501 PAX6P26367 422 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 PRB3Q04118 309 aaPredicted RBP6.67□□□□□ -1.34
USP54-203ENST00000418501 RNF212Q495C1 297 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 MIR17HGQ75NE6 70 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 RNF125Q96EQ8 232 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 BBC3Q96PG8 261 aaPredicted RBP6.67□□□□□ -1.34
USP54-203ENST00000418501 PARLQ9H300 379 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 M0QZ24 198 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 CRYBA1P05813 215 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 APELAP0DMC3 54 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 FCGR2BP31994 310 aaPredicted RBP6.67□□□□□ -1.34
USP54-203ENST00000418501 ZNF726P1Q15940 193 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 C5orf17Q8NAS9 161 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 SDF2L1Q9HCN8 221 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 PLA2G2EQ9NZK7 142 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 TMEM14CQ9P0S9 112 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 TMEM89A2RUT3 159 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 H3BUX3 64 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 Q8N9W7 124 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 AJUBAQ96IF1 538 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 C20orf24Q9BUV8 137 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 ABCA4P78363 2273 aa6.67□□□□□ -1.34
USP54-203ENST00000418501 C9JCJ5 164 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 FCN1O00602 326 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 TRGV3P03979 118 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 IL4P05112 153 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 PLA2G2AP14555 144 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 RHOGP84095 191 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 SRSF3P84103 164 aaKnown RBP6.66□□□□□ -1.34
USP54-203ENST00000418501 NBASA2RRP1 2371 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 ACACBO00763 2458 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 LAMA1P25391 3075 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 TRAV9-1A0A075B6T8 112 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 RNF223E7ERA6 249 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 NBEAP1P0C6P0 100 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 CT45A10P0DMU9 189 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 OR8I2Q8N0Y5 310 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 TMEM170AQ8WVE7 144 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 BORCS7Q96B45 105 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 SMIM12Q96EX1 92 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 OTORQ9NRC9 128 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 IGLV11-55A0A075B6I3 123 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 IGHV3OR16-10A0A075B7F0 116 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 XKRY2A2RUG3 117 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 ZNF785A8K8V0 405 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 PPP5D1E7EU14 171 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 I3L2K1 104 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 CD24P25063 80 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 SUMO1P63165 101 aaKnown RBP6.66□□□□□ -1.34
USP54-203ENST00000418501 ZNF124Q15973 351 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 LY6EQ16553 131 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 RITA1Q96K30 269 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 JMJD8Q96S16 334 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 USF3Q68DE3 2245 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 SPTBN1Q01082 2364 aaKnown RBP6.66□□□□□ -1.34
USP54-203ENST00000418501 IGHV7-81A0A0B4J1V7 117 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 NDUFB4O95168 129 aa6.66□□□□□ -1.34
USP54-203ENST00000418501 ADCYAP1P18509 176 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms