RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 HSPA13P48723 471 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 UCP3P55916 312 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 TAS2R20P59543 309 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 GABARAPL2P60520 117 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 YPEL3P61236 119 aaPredicted RBP5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 IZUMO4Q1ZYL8 232 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 TMEM69Q5SWH9 247 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 CROCCP3Q8IVE0 287 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SPARTQ8N0X7 666 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 C15orf53Q8NAA6 179 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 ATG101Q9BSB4 218 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 VCX3BQ9H321 246 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 MRPL36Q9P0J6 103 aaKnown RBP5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 HLA-DRB4X5D2U9 266 aa5.58□□□□□ -1.52
HLA-DPA1-241ENST00000417724 LOC100506127A0A0U1RQW1 187 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 GSTZ1O43708 216 aaPredicted RBP5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 IGKV3-20P01619 116 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 HBE1P02100 147 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SLC25A4P12235 298 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 AKR1C2P52895 323 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 DAD1P61803 113 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 DHODHQ02127 395 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 UBE2NLQ5JXB2 153 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 TMEM88Q6PEY1 159 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 GSG1LQ6UXU4 331 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SIGLEC15Q6ZMC9 328 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 C6orf223Q8N319 242 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 OR1S2Q8NGQ3 325 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 CLUHP3Q96NS8 147 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 YTHDF1Q9BYJ9 559 aaKnown RBP5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SCRT2Q9NQ03 307 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 GOLT1BQ9Y3E0 138 aa5.57□□□□□ -1.52
HLA-DPA1-241ENST00000417724 NBDYA0A0U1RRE5 68 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 LOC102723971A0A1B0GUV8 181 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 BUB3O43684 328 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 IGKV1-5P01602 117 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 IL4P05112 153 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 P0C879 139 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 IGLC1P0CG04 106 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 RD3LP0DJH9 198 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 PGAM2P15259 253 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 OR10J1P30954 320 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 ID1P41134 155 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 HTR2BP41595 481 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 FXYD7P58549 80 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 BSXQ3C1V8 233 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SPATA31B1PQ5VZV4 182 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 ETFRF1Q6IPR1 90 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 PRSS54Q6PEW0 395 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 IZUMO2Q6UXV1 221 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SAMD12Q8N8I0 201 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 RRNAD1Q96FB5 475 aaKnown RBP5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 LINC00052Q96N35 136 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 C7orf50Q9BRJ6 194 aaKnown RBP5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 PFDN2Q9UHV9 154 aa5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 YTHDF2Q9Y5A9 579 aaKnown RBP5.56□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SMIM31A0A1B0GVY4 71 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 NUP62P37198 522 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 RND2P52198 227 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SPCS3P61009 180 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 RND3P61587 244 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 PSG9Q00887 426 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 USF2Q15853 346 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 RRN3P1Q2M238 152 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 GDF5OSQ5U4N7 250 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 FOXI2Q6ZQN5 318 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 ZNF709Q8N972 641 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 OR4B1Q8NGF8 309 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 RNASEH2CQ8TDP1 164 aaKnown RBP5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 GPX8Q8TED1 209 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 ZNF486Q96H40 463 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SAV1Q9H4B6 383 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SCPEP1Q9HB40 452 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 HEYLQ9NQ87 328 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 KLK11Q9UBX7 282 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 RAB26Q9ULW5 256 aa5.55□□□□□ -1.52
HLA-DPA1-241ENST00000417724 C3orf85A0A1B0GTC6 90 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 ANKRD65E5RJM6 399 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 TOMM40O96008 361 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 RCVRNP35243 200 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 ALDH3B2P48448 385 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 PSMB3P49720 205 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 CCL18P55774 89 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 PIGPP57054 158 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 ZNF79Q15937 498 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 TRIM16LQ309B1 348 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 C2orf83Q53S99 150 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 EBLN2Q6P2I7 272 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 NOXA1Q86UR1 476 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 C1orf158Q8N1D5 194 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 OR52E5Q8NH55 327 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 ZNRF2Q8NHG8 242 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 COQ8AQ8NI60 647 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 RNASE11Q8TAA1 199 aaKnown RBP5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 NPIPB3Q92617 1050 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 TP53RKQ96S44 253 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 TMEM208Q9BTX3 173 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 MAGT1Q9H0U3 335 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 SLC35B3Q9H1N7 401 aa5.54□□□□□ -1.52
HLA-DPA1-241ENST00000417724 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms