RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 TMA7Q9Y2S6 64 aaKnown RBP13.27□□□□□ -0.29
SSBP3-205ENST00000417664 ASH1LQ9NR48 2969 aaKnown RBP13.26□□□□□ -0.29
SSBP3-205ENST00000417664 TRAV30A0A087WSZ9 112 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 TSPAN4O14817 238 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 IGLC1P0CG04 106 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 PLA2G2AP14555 144 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 HIST1H1BP16401 226 aaKnown RBP13.26□□□□□ -0.29
SSBP3-205ENST00000417664 KLK9Q2XQG4 91 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 CST9LP1Q5W188 147 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 RUSC1-AS1Q66K80 236 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 MBD6Q96DN6 1003 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 SMIM7Q9BQ49 75 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 SDF2L1Q9HCN8 221 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 NAT8Q9UHE5 227 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 KLK9Q9UKQ9 250 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 PRELID1Q9Y255 219 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 MOB4Q9Y3A3 225 aa13.26□□□□□ -0.29
SSBP3-205ENST00000417664 EGR2P11161 476 aaPredicted RBP13.25□□□□□ -0.29
SSBP3-205ENST00000417664 STXBP6Q8NFX7 210 aa13.25□□□□□ -0.29
SSBP3-205ENST00000417664 FANCD2OSQ96PS1 177 aa13.25□□□□□ -0.29
SSBP3-205ENST00000417664 C20orf24Q9BUV8 137 aa13.25□□□□□ -0.29
SSBP3-205ENST00000417664 OR7C2O60412 319 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 IGHV4-38-2P0DP08 117 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 COL8A1P27658 744 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 UBE2G2P60604 165 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 TMEM241Q24JQ0 296 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 AKIRIN2Q53H80 203 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 PRSS57Q6UWY2 283 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 BRD3OSQ6XYD6 125 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 C5orf56Q8N8D9 126 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 C15orf54Q8N8G6 183 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 PARLQ9H300 379 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 A0A0U1RQK1 487 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 HYPMO75409 117 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 SCGB2A1O75556 95 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 PATE2Q6UY27 113 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 FAM110DQ8TAY7 271 aaPredicted RBP13.24□□□□□ -0.29
SSBP3-205ENST00000417664 PIFOQ8TCI5 191 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 UHRF2Q96PU4 802 aa13.24□□□□□ -0.29
SSBP3-205ENST00000417664 KMT2BQ9UMN6 2715 aaPredicted RBP13.23□□□□□ -0.29
SSBP3-205ENST00000417664 IGHV3OR16-10A0A075B7F0 116 aa13.23□□□□□ -0.29
SSBP3-205ENST00000417664 IGHV3-21A0A0B4J1V1 117 aa13.23□□□□□ -0.29
SSBP3-205ENST00000417664 ATP5G3P48201 142 aa13.23□□□□□ -0.29
SSBP3-205ENST00000417664 MFAP4P55083 255 aa13.23□□□□□ -0.29
SSBP3-205ENST00000417664 KRTAP10-9P60411 292 aa13.23□□□□□ -0.29
SSBP3-205ENST00000417664 OR51G1Q8NGK1 321 aa13.23□□□□□ -0.29
SSBP3-205ENST00000417664 RPUSD4Q96CM3 377 aaKnown RBP13.23□□□□□ -0.29
SSBP3-205ENST00000417664 FAM167A-AS1Q96KT0 104 aa13.23□□□□□ -0.29
SSBP3-205ENST00000417664 ZNF355PQ9NSJ1 428 aa13.23□□□□□ -0.29
SSBP3-205ENST00000417664 TMEM242Q9NWH2 141 aa13.23□□□□□ -0.29
SSBP3-205ENST00000417664 DOK5Q9P104 306 aa13.23□□□□□ -0.29
SSBP3-205ENST00000417664 A0A1W2PRE2 83 aa13.22□□□□□ -0.29
SSBP3-205ENST00000417664 CXorf65A6NEN9 183 aa13.22□□□□□ -0.29
SSBP3-205ENST00000417664 M0QZK8 103 aa13.22□□□□□ -0.29
SSBP3-205ENST00000417664 LINC00305Q7Z4B0 112 aa13.22□□□□□ -0.29
SSBP3-205ENST00000417664 OR5AU1Q8NGC0 362 aa13.22□□□□□ -0.29
SSBP3-205ENST00000417664 ZNF503Q96F45 646 aa13.22□□□□□ -0.29
SSBP3-205ENST00000417664 TXN2Q99757 166 aa13.22□□□□□ -0.29
SSBP3-205ENST00000417664 SSX3Q99909 188 aa13.22□□□□□ -0.29
SSBP3-205ENST00000417664 HSPB9Q9BQS6 159 aa13.22□□□□□ -0.29
SSBP3-205ENST00000417664 SLC25A2Q9BXI2 301 aa13.22□□□□□ -0.29
SSBP3-205ENST00000417664 PITPNC1Q9UKF7 332 aa13.22□□□□□ -0.29
SSBP3-205ENST00000417664 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.22□□□□□ -0.291e-8■■■■■ 26.8
SSBP3-205ENST00000417664 IGKV1-17P01599 117 aa13.21□□□□□ -0.29
SSBP3-205ENST00000417664 RD3LP0DJH9 198 aa13.21□□□□□ -0.29
SSBP3-205ENST00000417664 PSG1P11464 419 aa13.21□□□□□ -0.29
SSBP3-205ENST00000417664 ORM2P19652 201 aa13.21□□□□□ -0.29
SSBP3-205ENST00000417664 FCGR2BP31994 310 aaPredicted RBP13.21□□□□□ -0.29
SSBP3-205ENST00000417664 YPEL3P61236 119 aaPredicted RBP13.21□□□□□ -0.29
SSBP3-205ENST00000417664 C16orf82Q7Z2V1 217 aa13.21□□□□□ -0.29
SSBP3-205ENST00000417664 S100A7AQ86SG5 101 aa13.21□□□□□ -0.29
SSBP3-205ENST00000417664 OR1B1Q8NGR6 318 aa13.21□□□□□ -0.29
SSBP3-205ENST00000417664 C11orf52Q96A22 123 aa13.21□□□□□ -0.29
SSBP3-205ENST00000417664 YTHDF2Q9Y5A9 579 aaKnown RBP13.21□□□□□ -0.29
SSBP3-205ENST00000417664 USP9YO00507 2555 aaPredicted RBP13.21□□□□□ -0.29
SSBP3-205ENST00000417664 CRYBG3Q68DQ2 2970 aa13.21□□□□□ -0.29
SSBP3-205ENST00000417664 CRIP2P52943 208 aaPredicted RBP13.21□□□□□ -0.3
SSBP3-205ENST00000417664 ZNF674Q2M3X9 581 aa13.21□□□□□ -0.3
SSBP3-205ENST00000417664 KLF17Q5JT82 389 aaPredicted RBP13.21□□□□□ -0.3
SSBP3-205ENST00000417664 UNQ5815/PRO19632Q6UWF5 114 aa13.21□□□□□ -0.3
SSBP3-205ENST00000417664 VN1R17PQ8TDU5 208 aa13.21□□□□□ -0.3
SSBP3-205ENST00000417664 PAXXQ9BUH6 204 aa13.21□□□□□ -0.3
SSBP3-205ENST00000417664 TMUB1Q9BVT8 246 aa13.21□□□□□ -0.3
SSBP3-205ENST00000417664 OR51M1Q9H341 326 aa13.21□□□□□ -0.3
SSBP3-205ENST00000417664 ANKRD17O75179 2603 aaKnown RBP13.2□□□□□ -0.3
SSBP3-205ENST00000417664 ATP6V0E1O15342 81 aa13.2□□□□□ -0.3
SSBP3-205ENST00000417664 GNG7O60262 68 aa13.2□□□□□ -0.3
SSBP3-205ENST00000417664 TOMM40O96008 361 aa13.2□□□□□ -0.3
SSBP3-205ENST00000417664 NPPCP23582 126 aa13.2□□□□□ -0.3
SSBP3-205ENST00000417664 AKR1C3P42330 323 aa13.2□□□□□ -0.3
SSBP3-205ENST00000417664 Q5PR19 223 aa13.2□□□□□ -0.3
SSBP3-205ENST00000417664 OR5T1Q8NG75 326 aa13.2□□□□□ -0.3
SSBP3-205ENST00000417664 CTDSP1Q9GZU7 261 aa13.2□□□□□ -0.3
SSBP3-205ENST00000417664 C21orf62Q9NYP8 219 aa13.2□□□□□ -0.3
SSBP3-205ENST00000417664 HIGD1AQ9Y241 93 aa13.2□□□□□ -0.3
SSBP3-205ENST00000417664 UTP20O75691 2785 aaKnown RBP13.2□□□□□ -0.3
SSBP3-205ENST00000417664 COLCA2A8K830 154 aa13.19□□□□□ -0.3
SSBP3-205ENST00000417664 NDUFB4O95168 129 aa13.19□□□□□ -0.3
SSBP3-205ENST00000417664 UBE2L3P68036 154 aaKnown RBP13.19□□□□□ -0.3
SSBP3-205ENST00000417664 TIGITQ495A1 244 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms