RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 MLANAQ16655 118 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 ZFP69Q49AA0 526 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 FAM106AQ4KMX7 169 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 TCTE3Q8IZS6 198 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 OR4X1Q8NH49 305 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 SCGB1C1Q8TD33 95 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 TMEM170AQ8WVE7 144 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 CCDC140Q96MF4 163 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 ATP6V0BQ99437 205 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 RNF126Q9BV68 326 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 GGACTQ9BVM4 153 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 FNDC4Q9H6D8 234 aaPredicted RBP6.55□□□□□ -1.36
TRIM48-201ENST00000417545 NPVFQ9HCQ7 196 aa6.55□□□□□ -1.36
TRIM48-201ENST00000417545 SETD2Q9BYW2 2564 aaPredicted RBP6.55□□□□□ -1.36
TRIM48-201ENST00000417545 BORCS7-ASMTA0A0B4J1R7 106 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 IGHV3-35A0A0C4DH35 117 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 ZNF320A2RRD8 509 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 LYL1P12980 280 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 FGF7P21781 194 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 RUNX1Q01196 453 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 NHLH2Q02577 135 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 GAMTQ14353 236 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 KLK9Q2XQG4 91 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 TIGITQ495A1 244 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 LINC01559Q495D7 138 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 PVRIGQ6DKI7 326 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 TEPPQ6URK8 271 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 ZNF709Q8N972 641 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 Q8WTZ3 238 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 NARS2Q96I59 477 aaKnown RBP6.54□□□□□ -1.36
TRIM48-201ENST00000417545 RAX2Q96IS3 184 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 ATP5SQ99766 215 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 C20orf24Q9BUV8 137 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 MFFQ9GZY8 342 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 C11orf1Q9H5F2 150 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 KLK9Q9UKQ9 250 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 NF1P21359 2839 aa6.54□□□□□ -1.36
TRIM48-201ENST00000417545 KANTRA0A1W2PQU2 76 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 FNDC10F2Z333 226 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 C17orf112F2Z3M2 114 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 OR2C1O95371 312 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 TRBV12-3P01733 135 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 CD33P20138 364 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 C4BPBP20851 252 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 HOXD3P31249 432 aaPredicted RBP6.53□□□□□ -1.36
TRIM48-201ENST00000417545 FCGR2BP31994 310 aaPredicted RBP6.53□□□□□ -1.36
TRIM48-201ENST00000417545 SLURP1P55000 103 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 KIAA0141Q14154 515 aaPredicted RBP6.53□□□□□ -1.36
TRIM48-201ENST00000417545 ZNF266Q14584 549 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 Q5BKY6 102 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 ZNF600Q6ZNG1 722 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 TMEM144Q7Z5S9 345 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 C1QL4Q86Z23 238 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 TMEM116Q8NCL8 245 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 BPIFCQ8NFQ6 507 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 PPP1R14BQ96C90 147 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 ST6GAL2Q96JF0 529 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 HYLS1Q96M11 299 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 AQP10Q96PS8 301 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 GINS3Q9BRX5 216 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 PBDC1Q9BVG4 233 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 ELOVL1Q9BW60 279 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 KCNIP2Q9NS61 270 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 PEMTQ9UBM1 199 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 FBXL17Q9UF56 701 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 TNFSF18Q9UNG2 199 aa6.53□□□□□ -1.36
TRIM48-201ENST00000417545 A0A0D9SG52 128 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 PMS2P5A8MQ11 134 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 PRSS46E5RG02 174 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 BMPR1BO00238 502 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 OVOL1O14753 267 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 MPDU1O75352 247 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 C1QBP02746 253 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 RD3LP0DJH9 198 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 S100A7P31151 101 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 EIF2B2P49770 351 aaKnown RBP6.52□□□□□ -1.37
TRIM48-201ENST00000417545 SYNJ2BPP57105 145 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 ARL16Q0P5N6 197 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 OR2F1Q13607 317 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 C4orf48Q5BLP8 95 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 BTNL8Q6UX41 500 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 S100A7AQ86SG5 101 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 HAPLN4Q86UW8 402 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 SPATA3Q8NHX4 192 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 CHRDL1Q9BU40 450 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 MRPL36Q9P0J6 103 aaKnown RBP6.52□□□□□ -1.37
TRIM48-201ENST00000417545 PFDN2Q9UHV9 154 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 UFC1Q9Y3C8 167 aa6.52□□□□□ -1.37
TRIM48-201ENST00000417545 HMSDA8MTL9 139 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 ADARB2-AS1A8MUL3 147 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 NDUFA4O00483 81 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 TSPAN15O95858 294 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 TOMM40O96008 361 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 CFDP00746 253 aaPredicted RBP6.51□□□□□ -1.37
TRIM48-201ENST00000417545 IL4P05112 153 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 IGLC1P0CG04 106 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 BMI1P35226 326 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 CAMLGP49069 296 aa6.51□□□□□ -1.37
TRIM48-201ENST00000417545 LYZP61626 148 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms