RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 THBDP07204 575 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 AMTP48728 403 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 SLAQ13239 276 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 PNKDQ8N490 385 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 NUP37Q8NFH4 326 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 BLNKQ8WV28 456 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 C19orf24Q9BVV8 132 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 SMIM27A0A1W2PRY6 76 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 A0A1W2PS18 150 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 TMEM178BH3BS89 294 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 USF1P22415 310 aaPredicted RBP11.67□□□□□ -0.54
HDAC9-208ENST00000417496 BRS3P32247 399 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 TEX43Q6ZNM6 134 aa11.67□□□□□ -0.54
HDAC9-208ENST00000417496 CRYABP02511 175 aaKnown RBP11.66□□□□□ -0.54
HDAC9-208ENST00000417496 RAB4AP20338 218 aa11.66□□□□□ -0.54
HDAC9-208ENST00000417496 LINC00305Q7Z4B0 112 aa11.66□□□□□ -0.54
HDAC9-208ENST00000417496 TMEM167AQ8TBQ9 72 aa11.66□□□□□ -0.54
HDAC9-208ENST00000417496 RPH3ALQ9UNE2 315 aa11.66□□□□□ -0.54
HDAC9-208ENST00000417496 A0A1W2PPI3 338 aa11.66□□□□□ -0.54
HDAC9-208ENST00000417496 CORTO00230 105 aa11.66□□□□□ -0.54
HDAC9-208ENST00000417496 CNTFRP26992 372 aa11.66□□□□□ -0.54
HDAC9-208ENST00000417496 MEF2CQ06413 473 aaPredicted RBP11.66□□□□□ -0.54
HDAC9-208ENST00000417496 ZNF329Q86UD4 541 aa11.66□□□□□ -0.54
HDAC9-208ENST00000417496 NEU1Q99519 415 aa11.66□□□□□ -0.54
HDAC9-208ENST00000417496 GSX1Q9H4S2 264 aaPredicted RBP11.66□□□□□ -0.54
HDAC9-208ENST00000417496 NRN1Q9NPD7 142 aa11.66□□□□□ -0.54
HDAC9-208ENST00000417496 TRBV9A0A0B4J1U6 114 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 NDUFB3O43676 98 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 AMY1AP04745 511 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 PRB4P10163 310 aaPredicted RBP11.65□□□□□ -0.54
HDAC9-208ENST00000417496 TDGF1P3P51864 188 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 LEMD1Q68G75 181 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 ZNF841Q6ZN19 808 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 ST6GALNAC6Q969X2 333 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 VAMP8Q9BV40 100 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 SSBP4Q9BWG4 385 aaPredicted RBP11.65□□□□□ -0.54
HDAC9-208ENST00000417496 MRPL32Q9BYC8 188 aaKnown RBP11.65□□□□□ -0.54
HDAC9-208ENST00000417496 TCRBV4S1A1TA0A5B7 111 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 A6NNC1 897 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 C22orf46C9J442 243 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 FSTL3O95633 263 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 GPR6P46095 362 aaPredicted RBP11.65□□□□□ -0.54
HDAC9-208ENST00000417496 MFAP2P55001 183 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 ATP5IP56385 69 aaPredicted RBP11.65□□□□□ -0.54
HDAC9-208ENST00000417496 BATFQ16520 125 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 GDF5OSQ5U4N7 250 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 WDR73Q6P4I2 378 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 Q8N976 141 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 NUDT10Q8NFP7 164 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 OR1B1Q8NGR6 318 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 FXYD5Q96DB9 178 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 NUDT11Q96G61 164 aa11.65□□□□□ -0.54
HDAC9-208ENST00000417496 MALRD1Q5VYJ5 2156 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 TLN1Q9Y490 2541 aaKnown RBP11.64□□□□□ -0.55
HDAC9-208ENST00000417496 DIRC3C9JPN6 131 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 APCSP02743 223 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 NTF3P20783 257 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 MRGPRG-AS1Q2M3A8 158 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 WASHC3Q9Y3C0 194 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 ZNF318Q5VUA4 2279 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 A0A1W2PN81 502 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 PEX7O00628 323 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 MT-ND6P03923 174 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 LOXP28300 417 aaPredicted RBP11.64□□□□□ -0.55
HDAC9-208ENST00000417496 TMEM30BQ3MIR4 351 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 LRRC10Q5BKY1 277 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 ABHD17AQ96GS6 310 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 TMEM68Q96MH6 324 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 NBASA2RRP1 2371 aa11.64□□□□□ -0.55
HDAC9-208ENST00000417496 IZUMO1RA6ND01 250 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 CAMPP49913 170 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 TMEM183BQ1AE95 376 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 PDPNQ86YL7 162 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 NUP35Q8NFH5 326 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 MIEN1Q9BRT3 115 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 WNT10AQ9GZT5 417 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 ZNF331Q9NQX6 463 aaPredicted RBP11.63□□□□□ -0.55
HDAC9-208ENST00000417496 ZNF586Q9NXT0 402 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 VWC2LB2RUY7 222 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 LYNX1G3V0Z9 82 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 LYNX1P0DP58 116 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 IGF2-ASQ6U949 168 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 ATOH7Q8N100 152 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 VSTM2AQ8TAG5 236 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 TMEM186Q96B77 213 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 KCNS1Q96KK3 526 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 C20orf144Q9BQM9 153 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 TNFRSF19Q9NS68 423 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 SPTA1P02549 2419 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 ABCA4P78363 2273 aa11.63□□□□□ -0.55
HDAC9-208ENST00000417496 PRRG2O14669 202 aa11.62□□□□□ -0.55
HDAC9-208ENST00000417496 HLA-DQA1P01909 254 aa11.62□□□□□ -0.55
HDAC9-208ENST00000417496 CD24P25063 80 aa11.62□□□□□ -0.55
HDAC9-208ENST00000417496 CASP6P55212 293 aa11.62□□□□□ -0.55
HDAC9-208ENST00000417496 OR10J3Q5JRS4 329 aa11.62□□□□□ -0.55
HDAC9-208ENST00000417496 C11orf42Q8N5U0 333 aa11.62□□□□□ -0.55
HDAC9-208ENST00000417496 PRSS33Q8NF86 280 aa11.62□□□□□ -0.55
HDAC9-208ENST00000417496 TSKUQ8WUA8 353 aa11.62□□□□□ -0.55
HDAC9-208ENST00000417496 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
HDAC9-208ENST00000417496 ASH1LQ9NR48 2969 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms