RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 C15orf62A8K5M9 175 aa13.46□□□□□ -0.25
VCP-202ENST00000417448 GNG7O60262 68 aa13.46□□□□□ -0.25
VCP-202ENST00000417448 SIX6O95475 246 aa13.46□□□□□ -0.25
VCP-202ENST00000417448 FAM106AQ4KMX7 169 aa13.46□□□□□ -0.25
VCP-202ENST00000417448 BSCL2Q96G97 398 aaPredicted RBP13.46□□□□□ -0.25
VCP-202ENST00000417448 C2orf70A6NJV1 201 aa13.45□□□□□ -0.26
VCP-202ENST00000417448 SSSCA1O60232 199 aa13.45□□□□□ -0.26
VCP-202ENST00000417448 TMEM50AO95807 157 aa13.45□□□□□ -0.26
VCP-202ENST00000417448 IFNA4P05014 189 aa13.45□□□□□ -0.26
VCP-202ENST00000417448 NKX2-1P43699 371 aaPredicted RBP13.45□□□□□ -0.26
VCP-202ENST00000417448 ID3Q02535 119 aa13.45□□□□□ -0.26
VCP-202ENST00000417448 GTSCR1Q86UQ5 136 aa13.45□□□□□ -0.26
VCP-202ENST00000417448 MARVELD1Q9BSK0 173 aa13.45□□□□□ -0.26
VCP-202ENST00000417448 C20orf24Q9BUV8 137 aa13.45□□□□□ -0.26
VCP-202ENST00000417448 U3KQ87 197 aa13.45□□□□□ -0.26
VCP-202ENST00000417448 TMEM213A2RRL7 107 aa13.44□□□□□ -0.26
VCP-202ENST00000417448 FAM90A26D6RGX4 464 aa13.44□□□□□ -0.26
VCP-202ENST00000417448 MED6O75586 246 aa13.44□□□□□ -0.26
VCP-202ENST00000417448 DEDDO75618 318 aa13.44□□□□□ -0.26
VCP-202ENST00000417448 FOLR2P14207 255 aa13.44□□□□□ -0.26
VCP-202ENST00000417448 TIGITQ495A1 244 aa13.44□□□□□ -0.26
VCP-202ENST00000417448 SPANXN5Q5MJ07 72 aa13.44□□□□□ -0.26
VCP-202ENST00000417448 PRSS54Q6PEW0 395 aa13.44□□□□□ -0.26
VCP-202ENST00000417448 WDR89Q96FK6 387 aaPredicted RBP13.44□□□□□ -0.26
VCP-202ENST00000417448 ACY3Q96HD9 319 aa13.44□□□□□ -0.26
VCP-202ENST00000417448 ZNF436Q9C0F3 470 aaPredicted RBP13.44□□□□□ -0.26
VCP-202ENST00000417448 PEMTQ9UBM1 199 aa13.44□□□□□ -0.26
VCP-202ENST00000417448 IGHV3-49A0A0A0MS15 119 aa13.43□□□□□ -0.26
VCP-202ENST00000417448 LGALS9O00182 355 aa13.43□□□□□ -0.26
VCP-202ENST00000417448 CORTO00230 105 aa13.43□□□□□ -0.26
VCP-202ENST00000417448 NUPL2O15504 423 aaKnown RBP13.43□□□□□ -0.26
VCP-202ENST00000417448 YIF1AO95070 293 aa13.43□□□□□ -0.26
VCP-202ENST00000417448 MBPP02686 304 aaPredicted RBP13.43□□□□□ -0.26
VCP-202ENST00000417448 NPBWR1P48145 328 aa13.43□□□□□ -0.26
VCP-202ENST00000417448 RND2P52198 227 aa13.43□□□□□ -0.26
VCP-202ENST00000417448 PAX9P55771 341 aa13.43□□□□□ -0.26
VCP-202ENST00000417448 SPSB3Q6PJ21 355 aa13.43□□□□□ -0.26
VCP-202ENST00000417448 TXN2Q99757 166 aa13.43□□□□□ -0.26
VCP-202ENST00000417448 GPN1Q9HCN4 374 aaPredicted RBP13.43□□□□□ -0.26
VCP-202ENST00000417448 CACFD1Q9UGQ2 172 aa13.43□□□□□ -0.26
VCP-202ENST00000417448 RCL1Q9Y2P8 373 aaKnown RBP13.43□□□□□ -0.26
VCP-202ENST00000417448 CCNKO75909 580 aa13.42□□□□□ -0.26
VCP-202ENST00000417448 CBLN1P23435 193 aa13.42□□□□□ -0.26
VCP-202ENST00000417448 FCGR2BP31994 310 aaPredicted RBP13.42□□□□□ -0.26
VCP-202ENST00000417448 PMS2P11Q13670 270 aa13.42□□□□□ -0.26
VCP-202ENST00000417448 OR4X1Q8NH49 305 aa13.42□□□□□ -0.26
VCP-202ENST00000417448 RNASEH2CQ8TDP1 164 aaKnown RBP13.42□□□□□ -0.26
VCP-202ENST00000417448 TMEM190Q8WZ59 177 aa13.42□□□□□ -0.26
VCP-202ENST00000417448 NPIPB3Q92617 1050 aa13.42□□□□□ -0.26
VCP-202ENST00000417448 PSENENQ9NZ42 101 aa13.42□□□□□ -0.26
VCP-202ENST00000417448 LSM5Q9Y4Y9 91 aaKnown RBP13.42□□□□□ -0.26
VCP-202ENST00000417448 PKHD1P08F94 4074 aa13.41□□□□□ -0.26
VCP-202ENST00000417448 IGHV3OR16-13A0A075B7E8 117 aa13.41□□□□□ -0.26
VCP-202ENST00000417448 IGHV3-74A0A0B4J1X5 117 aa13.41□□□□□ -0.26
VCP-202ENST00000417448 GOSR2O14653 212 aa13.41□□□□□ -0.26
VCP-202ENST00000417448 CLN5O75503 358 aa13.41□□□□□ -0.26
VCP-202ENST00000417448 TOMM20LQ6UXN7 152 aa13.41□□□□□ -0.26
VCP-202ENST00000417448 SLC16A13Q7RTY0 426 aa13.41□□□□□ -0.26
VCP-202ENST00000417448 C2orf50Q96LR7 162 aa13.41□□□□□ -0.26
VCP-202ENST00000417448 MLXQ9UH92 298 aa13.41□□□□□ -0.26
VCP-202ENST00000417448 ABCA13Q86UQ4 5058 aa13.41□□□□□ -0.26
VCP-202ENST00000417448 RPS10-NUDT3A0A1W2PQS6 291 aa13.4□□□□□ -0.26
VCP-202ENST00000417448 NDUFA4O00483 81 aa13.4□□□□□ -0.26
VCP-202ENST00000417448 IGKV1-17P01599 117 aa13.4□□□□□ -0.26
VCP-202ENST00000417448 CD300EQ496F6 205 aaPredicted RBP13.4□□□□□ -0.26
VCP-202ENST00000417448 GSG1LQ6UXU4 331 aa13.4□□□□□ -0.26
VCP-202ENST00000417448 DYNLRB2Q8TF09 96 aa13.4□□□□□ -0.26
VCP-202ENST00000417448 CIB3Q96Q77 187 aaPredicted RBP13.4□□□□□ -0.26
VCP-202ENST00000417448 ATP6V0BQ99437 205 aa13.4□□□□□ -0.26
VCP-202ENST00000417448 WFDC10AQ9H1F0 79 aa13.4□□□□□ -0.26
VCP-202ENST00000417448 PUS1Q9Y606 427 aaKnown RBP eCLIP13.4□□□□□ -0.26
VCP-202ENST00000417448 CXorf65A6NEN9 183 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 SNRPGP15A8MWD9 76 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 A8MWP6 167 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 PRAF2O60831 178 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 RAB11AP62491 216 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 EWSR1Q01844 656 aaKnown RBP eCLIP13.39□□□□□ -0.27
VCP-202ENST00000417448 GAMTQ14353 236 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 OR8G2PQ6IF36 304 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 LCN12Q6JVE5 192 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 BTNL8Q6UX41 500 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 NOXA1Q86UR1 476 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 SMIM8Q96KF7 97 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 UFC1Q9Y3C8 167 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 STRAPQ9Y3F4 350 aaKnown RBP13.39□□□□□ -0.27
VCP-202ENST00000417448 ALG5Q9Y673 324 aa13.39□□□□□ -0.27
VCP-202ENST00000417448 MUC4Q99102 2169 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 IGHV3-66A0A0C4DH42 116 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 C7orf66A4D0T2 115 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 K7EPK0 472 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 SSNA1O43805 119 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 METTL15P1P0C7V9 234 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 IGLC1P0CG04 106 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 SLC25A4P12235 298 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 OR10J1P30954 320 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 CD81P60033 236 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 S100A10P60903 97 aa13.38□□□□□ -0.27
VCP-202ENST00000417448 RELQ04864 619 aaPredicted RBP13.38□□□□□ -0.27
VCP-202ENST00000417448 RAB32Q13637 225 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms