RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 OR13A1Q8NGR1 328 aa12.04□□□□□ -0.48
NCKIPSD-204ENST00000416649 OR4A5Q8NH83 315 aa12.04□□□□□ -0.48
NCKIPSD-204ENST00000416649 ABI3Q9P2A4 366 aa12.04□□□□□ -0.48
NCKIPSD-204ENST00000416649 TNRC6AQ8NDV7 1962 aaKnown RBP12.03□□□□□ -0.48
NCKIPSD-204ENST00000416649 DYSFO75923 2080 aa12.03□□□□□ -0.48
NCKIPSD-204ENST00000416649 VWC2LB2RUY7 222 aa12.03□□□□□ -0.48
NCKIPSD-204ENST00000416649 LGALS7P47929 136 aa12.03□□□□□ -0.48
NCKIPSD-204ENST00000416649 HLA-DRB1P01911 266 aa12.03□□□□□ -0.48
NCKIPSD-204ENST00000416649 MAGEA5P43359 124 aa12.03□□□□□ -0.48
NCKIPSD-204ENST00000416649 TEX45Q8NA69 505 aa12.03□□□□□ -0.48
NCKIPSD-204ENST00000416649 OR2K2Q8NGT1 345 aa12.03□□□□□ -0.48
NCKIPSD-204ENST00000416649 GRAMD2BQ96HH9 432 aa12.03□□□□□ -0.48
NCKIPSD-204ENST00000416649 ZNF835Q9Y2P0 537 aa12.03□□□□□ -0.48
NCKIPSD-204ENST00000416649 AMMECR1Q9Y4X0 333 aaPredicted RBP12.03□□□□□ -0.48
NCKIPSD-204ENST00000416649 DUTP33316 252 aaKnown RBP12.02□□□□□ -0.48
NCKIPSD-204ENST00000416649 PRR20EP86478 221 aa12.02□□□□□ -0.48
NCKIPSD-204ENST00000416649 PRR20CP86479 221 aa12.02□□□□□ -0.48
NCKIPSD-204ENST00000416649 PRR20DP86480 221 aa12.02□□□□□ -0.48
NCKIPSD-204ENST00000416649 PRR20BP86481 221 aa12.02□□□□□ -0.48
NCKIPSD-204ENST00000416649 PRR20AP86496 221 aa12.02□□□□□ -0.48
NCKIPSD-204ENST00000416649 MLANAQ16655 118 aa12.02□□□□□ -0.48
NCKIPSD-204ENST00000416649 OR10AG1Q8NH19 301 aa12.02□□□□□ -0.48
NCKIPSD-204ENST00000416649 WIPF2Q8TF74 440 aaPredicted RBP12.02□□□□□ -0.48
NCKIPSD-204ENST00000416649 FZR1Q9UM11 496 aa12.02□□□□□ -0.48
NCKIPSD-204ENST00000416649 BMI1P35226 326 aa12.02□□□□□ -0.49
NCKIPSD-204ENST00000416649 TMPRSS3P57727 454 aa12.02□□□□□ -0.49
NCKIPSD-204ENST00000416649 TAS2R45P59539 299 aa12.02□□□□□ -0.49
NCKIPSD-204ENST00000416649 Q8IYB0 196 aa12.02□□□□□ -0.49
NCKIPSD-204ENST00000416649 COQ2Q96H96 371 aa12.02□□□□□ -0.49
NCKIPSD-204ENST00000416649 PGLYRP4Q96LB8 373 aa12.02□□□□□ -0.49
NCKIPSD-204ENST00000416649 NKX2-8O15522 239 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 CRXO43186 299 aaPredicted RBP12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 PYYP10082 97 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 PLGLB1Q02325 96 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 C2orf91Q6ZV80 131 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 PERPQ96FX8 193 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 SPRY4Q9C004 299 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 THYN1Q9P016 225 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 OR51B2Q9Y5P1 312 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 A0A0G2JLM5 398 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 PROP1O75360 226 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 GNG5P63218 68 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 MEF2CQ06413 473 aaPredicted RBP12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 ZNF146Q15072 292 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 MORN5Q5VZ52 161 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 UFSP1Q6NVU6 142 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 RASL11AQ6T310 242 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 SLC25A10Q9UBX3 287 aaPredicted RBP12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 METRNQ9UJH8 293 aa12.01□□□□□ -0.49
NCKIPSD-204ENST00000416649 OR2J3O76001 311 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 FTH1P19P0C7X4 201 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 AZU1P20160 251 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 TM4SF20Q53R12 229 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 S1PR3Q99500 378 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 IDI2-AS1Q9NZ38 188 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 C9orf118A6NHY6 69 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 ZNF207O43670 478 aaKnown RBP12□□□□□ -0.49
NCKIPSD-204ENST00000416649 SMPD2O60906 423 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 HBBP68871 147 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 OR9G1Q8NH87 305 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 DEFB127Q9H1M4 99 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 OBP2BQ9NPH6 170 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 SPCS1Q9Y6A9 102 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 COL27A1Q8IZC6 1860 aaPredicted RBP12□□□□□ -0.49
NCKIPSD-204ENST00000416649 K7EP34 96 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 ERVK11-1P61568 191 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 SEC11AP67812 179 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 KIR3DS1Q14943 382 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 SLC35E4Q6ICL7 350 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 WDR31Q8NA23 367 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 MBD6Q96DN6 1003 aa12□□□□□ -0.49
NCKIPSD-204ENST00000416649 IGKV1OR2-108A0A075B7D4 117 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 A6NDN8 102 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 PLAUP00749 431 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 LIPFP07098 398 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 COX8AP10176 69 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 CCL11P51671 97 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 FAM162BQ5T6X4 162 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 LEAP2Q969E1 77 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 JKAMPQ9P055 326 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 KLF13Q9Y2Y9 288 aaPredicted RBP11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 IGF2RP11717 2491 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 KLK10O43240 276 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 SPINT2O43291 252 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 C8orf88P0DMB2 117 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 PRB4P10163 310 aaPredicted RBP11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 H1FXQ92522 213 aaKnown RBP11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 TMUB1Q9BVT8 246 aa11.99□□□□□ -0.49
NCKIPSD-204ENST00000416649 CHEK1O14757 476 aa11.98□□□□□ -0.49
NCKIPSD-204ENST00000416649 MS4A6AQ9H2W1 248 aa11.98□□□□□ -0.49
NCKIPSD-204ENST00000416649 RABAC1Q9UI14 185 aa11.98□□□□□ -0.49
NCKIPSD-204ENST00000416649 PPIAL4CA0A0B4J2A2 164 aa11.98□□□□□ -0.49
NCKIPSD-204ENST00000416649 SS18L1O75177 396 aaPredicted RBP11.98□□□□□ -0.49
NCKIPSD-204ENST00000416649 WISP2O76076 250 aa11.98□□□□□ -0.49
NCKIPSD-204ENST00000416649 PPIAL4GP0DN37 164 aa11.98□□□□□ -0.49
NCKIPSD-204ENST00000416649 GUSBP1Q15486 140 aa11.98□□□□□ -0.49
NCKIPSD-204ENST00000416649 RTL8BQ17RB0 113 aa11.98□□□□□ -0.49
NCKIPSD-204ENST00000416649 PET117Q6UWS5 81 aa11.98□□□□□ -0.49
NCKIPSD-204ENST00000416649 LRRC29Q8WV35 223 aa11.98□□□□□ -0.49
NCKIPSD-204ENST00000416649 CYC1P08574 325 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms