RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 VAMP1P23763 118 aa9.85□□□□□ -0.83
LINC01398-201ENST00000416581 SUB1P53999 127 aaKnown RBP eCLIP9.85□□□□□ -0.83
LINC01398-201ENST00000416581 HSPE1P61604 102 aaKnown RBP9.85□□□□□ -0.83
LINC01398-201ENST00000416581 C11orf45Q8TAV5 145 aa9.85□□□□□ -0.83
LINC01398-201ENST00000416581 RBPMSQ93062 196 aaKnown RBP9.85□□□□□ -0.83
LINC01398-201ENST00000416581 NARS2Q96I59 477 aaKnown RBP9.85□□□□□ -0.83
LINC01398-201ENST00000416581 SEC22AQ96IW7 307 aa9.85□□□□□ -0.83
LINC01398-201ENST00000416581 PDCD10Q9BUL8 212 aa9.85□□□□□ -0.83
LINC01398-201ENST00000416581 IGHV3-21A0A0B4J1V1 117 aa9.84□□□□□ -0.83
LINC01398-201ENST00000416581 C9orf170A2RU37 121 aa9.84□□□□□ -0.83
LINC01398-201ENST00000416581 INS-IGF2F8WCM5 200 aa9.84□□□□□ -0.83
LINC01398-201ENST00000416581 ZNF207O43670 478 aaKnown RBP9.84□□□□□ -0.83
LINC01398-201ENST00000416581 SNCAP37840 140 aa9.84□□□□□ -0.83
LINC01398-201ENST00000416581 EIF2B2P49770 351 aaKnown RBP9.84□□□□□ -0.83
LINC01398-201ENST00000416581 AKR1C2P52895 323 aa9.84□□□□□ -0.83
LINC01398-201ENST00000416581 DHRS2Q13268 280 aa9.84□□□□□ -0.83
LINC01398-201ENST00000416581 C4orf46Q504U0 113 aa9.84□□□□□ -0.83
LINC01398-201ENST00000416581 FAM90A2PQ658T7 463 aa9.84□□□□□ -0.83
LINC01398-201ENST00000416581 ZNF600Q6ZNG1 722 aa9.84□□□□□ -0.83
LINC01398-201ENST00000416581 SELENOHQ8IZQ5 122 aaKnown RBP9.84□□□□□ -0.83
LINC01398-201ENST00000416581 LGI3Q8N145 548 aa9.84□□□□□ -0.83
LINC01398-201ENST00000416581 LHFPL5Q8TAF8 219 aa9.84□□□□□ -0.83
LINC01398-201ENST00000416581 IGHV3OR16-8A0A075B7F1 116 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 DUXBA0A1W2PPF3 345 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 C11orf94C9JXX5 98 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 DNASE2O00115 360 aaPredicted RBP9.83□□□□□ -0.84
LINC01398-201ENST00000416581 ST8SIA3O43173 380 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 IGKV1-5P01602 117 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 P0C879 139 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 EWSR1Q01844 656 aaKnown RBP eCLIP9.83□□□□□ -0.84
LINC01398-201ENST00000416581 LCE2DQ5TA82 110 aaPredicted RBP9.83□□□□□ -0.84
LINC01398-201ENST00000416581 TMEM268Q5VZI3 342 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 TCF24Q7RTU0 167 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 APRG1Q8IVJ8 170 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 FAM219AQ8IW50 185 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 SLC35G3Q8N808 338 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 LRTM2Q8N967 370 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 OR11H2Q8NH07 326 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 PINX1Q96BK5 328 aaKnown RBP9.83□□□□□ -0.84
LINC01398-201ENST00000416581 RRNAD1Q96FB5 475 aaKnown RBP9.83□□□□□ -0.84
LINC01398-201ENST00000416581 MARVELD1Q9BSK0 173 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 HRH4Q9H3N8 390 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 VSIRQ9H7M9 311 aa9.83□□□□□ -0.84
LINC01398-201ENST00000416581 PLECQ15149 4684 aaKnown RBP9.82□□□□□ -0.84
LINC01398-201ENST00000416581 A0A0B4J2A0 478 aa9.82□□□□□ -0.84
LINC01398-201ENST00000416581 INMT-MINDY4F8WBC2 141 aa9.82□□□□□ -0.84
LINC01398-201ENST00000416581 CA1P00915 261 aaPredicted RBP9.82□□□□□ -0.84
LINC01398-201ENST00000416581 IL5P05113 134 aa9.82□□□□□ -0.84
LINC01398-201ENST00000416581 TFPI2P48307 235 aa9.82□□□□□ -0.84
LINC01398-201ENST00000416581 RGS21Q2M5E4 152 aa9.82□□□□□ -0.84
LINC01398-201ENST00000416581 MORN3Q6PF18 240 aaPredicted RBP9.82□□□□□ -0.84
LINC01398-201ENST00000416581 COQ8AQ8NI60 647 aa9.82□□□□□ -0.84
LINC01398-201ENST00000416581 RNASE11Q8TAA1 199 aaKnown RBP9.82□□□□□ -0.84
LINC01398-201ENST00000416581 C2CD4CQ8TF44 421 aa9.82□□□□□ -0.84
LINC01398-201ENST00000416581 GRAMD2BQ96HH9 432 aa9.82□□□□□ -0.84
LINC01398-201ENST00000416581 ENY2Q9NPA8 101 aa9.82□□□□□ -0.84
LINC01398-201ENST00000416581 PRR13Q9NZ81 148 aa9.82□□□□□ -0.84
LINC01398-201ENST00000416581 SHPKQ9UHJ6 478 aa9.82□□□□□ -0.84
LINC01398-201ENST00000416581 TRAV30A0A087WSZ9 112 aa9.81□□□□□ -0.84
LINC01398-201ENST00000416581 DBX1A6NMT0 343 aa9.81□□□□□ -0.84
LINC01398-201ENST00000416581 PRAF2O60831 178 aa9.81□□□□□ -0.84
LINC01398-201ENST00000416581 SPP1P10451 314 aa9.81□□□□□ -0.84
LINC01398-201ENST00000416581 STHQ8IWL8 128 aa9.81□□□□□ -0.84
LINC01398-201ENST00000416581 ZNF431Q8TF32 576 aaPredicted RBP9.81□□□□□ -0.84
LINC01398-201ENST00000416581 MITD1Q8WV92 249 aa9.81□□□□□ -0.84
LINC01398-201ENST00000416581 METTL26Q96S19 204 aa9.81□□□□□ -0.84
LINC01398-201ENST00000416581 CACFD1Q9UGQ2 172 aa9.81□□□□□ -0.84
LINC01398-201ENST00000416581 HERC2O95714 4834 aa9.81□□□□□ -0.84
LINC01398-201ENST00000416581 PCLOQ9Y6V0 5065 aa9.81□□□□□ -0.84
LINC01398-201ENST00000416581 IGKV3-7A0A075B6H7 116 aa9.8□□□□□ -0.84
LINC01398-201ENST00000416581 A0A0G2JRQ6 117 aa9.8□□□□□ -0.84
LINC01398-201ENST00000416581 RPS10-NUDT3A0A1W2PQS6 291 aa9.8□□□□□ -0.84
LINC01398-201ENST00000416581 NPPCP23582 126 aa9.8□□□□□ -0.84
LINC01398-201ENST00000416581 RPL11P62913 178 aaKnown RBP9.8□□□□□ -0.84
LINC01398-201ENST00000416581 TOMM20LQ6UXN7 152 aa9.8□□□□□ -0.84
LINC01398-201ENST00000416581 LYZL2Q7Z4W2 148 aa9.8□□□□□ -0.84
LINC01398-201ENST00000416581 SEC22CQ9BRL7 303 aa9.8□□□□□ -0.84
LINC01398-201ENST00000416581 GPN1Q9HCN4 374 aaPredicted RBP9.8□□□□□ -0.84
LINC01398-201ENST00000416581 FBXL17Q9UF56 701 aa9.8□□□□□ -0.84
LINC01398-201ENST00000416581 TMED3Q9Y3Q3 217 aa9.8□□□□□ -0.84
LINC01398-201ENST00000416581 PUS1Q9Y606 427 aaKnown RBP eCLIP9.8□□□□□ -0.84
LINC01398-201ENST00000416581 IGHV3-49A0A0A0MS15 119 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 A0A0B4J293 547 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 SNRPGP15A8MWD9 76 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 IFNA17P01571 189 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 MIFP14174 115 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 DEFB131AP59861 70 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 NMSQ5H8A3 153 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 PVRIGQ6DKI7 326 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 GBGT1Q8N5D6 347 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 ST8SIA2Q92186 375 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 GPR146Q96CH1 333 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 ZNF414Q96IQ9 312 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 MS4A6AQ9H2W1 248 aa9.79□□□□□ -0.84
LINC01398-201ENST00000416581 HELTA6NFD8 242 aa9.78□□□□□ -0.84
LINC01398-201ENST00000416581 CLN5O75503 358 aa9.78□□□□□ -0.84
LINC01398-201ENST00000416581 SULT1A3P0DMM9 295 aa9.78□□□□□ -0.84
LINC01398-201ENST00000416581 SULT1A4P0DMN0 295 aa9.78□□□□□ -0.84
LINC01398-201ENST00000416581 SLC25A6P12236 298 aa9.78□□□□□ -0.84
LINC01398-201ENST00000416581 OPRK1P41145 380 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms