RNA–Protein interactions for RNA: ENST00000416248.5

HDAC11-208, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-208ENST00000416248 NIPSNAP3BQ9BS92 247 aa13.55□□□□□ -0.24
HDAC11-208ENST00000416248 PDCD10Q9BUL8 212 aa13.55□□□□□ -0.24
HDAC11-208ENST00000416248 NRN1Q9NPD7 142 aa13.55□□□□□ -0.24
HDAC11-208ENST00000416248 RFNGQ9Y644 331 aa13.55□□□□□ -0.24
HDAC11-208ENST00000416248 HLA-DRB4X5D2U9 266 aa13.55□□□□□ -0.24
HDAC11-208ENST00000416248 PRSS3P35030 304 aa13.54□□□□□ -0.24
HDAC11-208ENST00000416248 ETV6P41212 452 aa13.54□□□□□ -0.24
HDAC11-208ENST00000416248 TNP2Q05952 138 aa13.54□□□□□ -0.24
HDAC11-208ENST00000416248 BSXQ3C1V8 233 aa13.54□□□□□ -0.24
HDAC11-208ENST00000416248 FAM222AQ5U5X8 452 aa13.54□□□□□ -0.24
HDAC11-208ENST00000416248 Q9H521 79 aa13.54□□□□□ -0.24
HDAC11-208ENST00000416248 IGLC1P0CG04 106 aa13.53□□□□□ -0.24
HDAC11-208ENST00000416248 AKR1C2P52895 323 aa13.53□□□□□ -0.24
HDAC11-208ENST00000416248 OXA1LQ15070 435 aa13.53□□□□□ -0.24
HDAC11-208ENST00000416248 OR1S2Q8NGQ3 325 aa13.53□□□□□ -0.24
HDAC11-208ENST00000416248 ENY2Q9NPA8 101 aa13.53□□□□□ -0.24
HDAC11-208ENST00000416248 LRP1BQ9NZR2 4599 aa13.52□□□□□ -0.24
HDAC11-208ENST00000416248 IGHV3OR16-12A0A075B7B8 117 aa13.52□□□□□ -0.25
HDAC11-208ENST00000416248 HTN3P15516 51 aa13.52□□□□□ -0.25
HDAC11-208ENST00000416248 NKX2-1P43699 371 aaPredicted RBP13.52□□□□□ -0.25
HDAC11-208ENST00000416248 FAM3BP58499 235 aaPredicted RBP13.52□□□□□ -0.25
HDAC11-208ENST00000416248 CROCCP3Q8IVE0 287 aa13.52□□□□□ -0.25
HDAC11-208ENST00000416248 SAMD12Q8N8I0 201 aa13.52□□□□□ -0.25
HDAC11-208ENST00000416248 Q8WTZ3 238 aa13.52□□□□□ -0.25
HDAC11-208ENST00000416248 RPS10-NUDT3A0A1W2PQS6 291 aa13.51□□□□□ -0.25
HDAC11-208ENST00000416248 YPEL3P61236 119 aaPredicted RBP13.51□□□□□ -0.25
HDAC11-208ENST00000416248 USF2Q15853 346 aaPredicted RBP13.51□□□□□ -0.25
HDAC11-208ENST00000416248 GDF5OSQ5U4N7 250 aa13.51□□□□□ -0.25
HDAC11-208ENST00000416248 TMEM88Q6PEY1 159 aa13.51□□□□□ -0.25
HDAC11-208ENST00000416248 SIGLEC15Q6ZMC9 328 aa13.51□□□□□ -0.25
HDAC11-208ENST00000416248 GPX8Q8TED1 209 aa13.51□□□□□ -0.25
HDAC11-208ENST00000416248 TP53RKQ96S44 253 aa13.51□□□□□ -0.25
HDAC11-208ENST00000416248 BUB3O43684 328 aa13.5□□□□□ -0.25
HDAC11-208ENST00000416248 ATG12O94817 140 aa13.5□□□□□ -0.25
HDAC11-208ENST00000416248 OR10J1P30954 320 aa13.5□□□□□ -0.25
HDAC11-208ENST00000416248 RND2P52198 227 aa13.5□□□□□ -0.25
HDAC11-208ENST00000416248 FXYD7P58549 80 aa13.5□□□□□ -0.25
HDAC11-208ENST00000416248 RND3P61587 244 aa13.5□□□□□ -0.25
HDAC11-208ENST00000416248 DHODHQ02127 395 aa13.5□□□□□ -0.25
HDAC11-208ENST00000416248 NEDD8Q15843 81 aa13.5□□□□□ -0.25
HDAC11-208ENST00000416248 PRSS54Q6PEW0 395 aa13.5□□□□□ -0.25
HDAC11-208ENST00000416248 Q8N1X5 172 aa13.5□□□□□ -0.25
HDAC11-208ENST00000416248 TMED3Q9Y3Q3 217 aa13.5□□□□□ -0.25
HDAC11-208ENST00000416248 IGKV3-20P01619 116 aa13.49□□□□□ -0.25
HDAC11-208ENST00000416248 IL4P05112 153 aa13.49□□□□□ -0.25
HDAC11-208ENST00000416248 ZNF709Q8N972 641 aa13.49□□□□□ -0.25
HDAC11-208ENST00000416248 HERC1Q15751 4861 aa13.48□□□□□ -0.25
HDAC11-208ENST00000416248 GSTZ1O43708 216 aaPredicted RBP13.48□□□□□ -0.25
HDAC11-208ENST00000416248 SLC25A4P12235 298 aa13.48□□□□□ -0.25
HDAC11-208ENST00000416248 PGAM2P15259 253 aa13.48□□□□□ -0.25
HDAC11-208ENST00000416248 PI3P19957 117 aa13.48□□□□□ -0.25
HDAC11-208ENST00000416248 HTR2BP41595 481 aa13.48□□□□□ -0.25
HDAC11-208ENST00000416248 PIGPP57054 158 aa13.48□□□□□ -0.25
HDAC11-208ENST00000416248 DEFB1P60022 68 aa13.48□□□□□ -0.25
HDAC11-208ENST00000416248 ZNF486Q96H40 463 aaPredicted RBP13.48□□□□□ -0.25
HDAC11-208ENST00000416248 CLUHP3Q96NS8 147 aa13.48□□□□□ -0.25
HDAC11-208ENST00000416248 YTHDF1Q9BYJ9 559 aaKnown RBP13.48□□□□□ -0.25
HDAC11-208ENST00000416248 SAV1Q9H4B6 383 aaPredicted RBP13.48□□□□□ -0.25
HDAC11-208ENST00000416248 YTHDF2Q9Y5A9 579 aaKnown RBP13.48□□□□□ -0.25
HDAC11-208ENST00000416248 A0A0G2JRQ6 117 aa13.47□□□□□ -0.25
HDAC11-208ENST00000416248 RCVRNP35243 200 aa13.47□□□□□ -0.25
HDAC11-208ENST00000416248 FOXI2Q6ZQN5 318 aa13.47□□□□□ -0.25
HDAC11-208ENST00000416248 C15orf53Q8NAA6 179 aa13.47□□□□□ -0.25
HDAC11-208ENST00000416248 SCPEP1Q9HB40 452 aa13.47□□□□□ -0.25
HDAC11-208ENST00000416248 C3orf85A0A1B0GTC6 90 aa13.46□□□□□ -0.25
HDAC11-208ENST00000416248 LOC102723971A0A1B0GUV8 181 aa13.46□□□□□ -0.25
HDAC11-208ENST00000416248 HBE1P02100 147 aa13.46□□□□□ -0.25
HDAC11-208ENST00000416248 RPS19P39019 145 aaKnown RBP13.46□□□□□ -0.25
HDAC11-208ENST00000416248 SPCS3P61009 180 aa13.46□□□□□ -0.25
HDAC11-208ENST00000416248 TRIM16LQ309B1 348 aa13.46□□□□□ -0.25
HDAC11-208ENST00000416248 AARDQ4LEZ3 155 aa13.46□□□□□ -0.25
HDAC11-208ENST00000416248 C6orf223Q8N319 242 aa13.46□□□□□ -0.25
HDAC11-208ENST00000416248 RNASEH2CQ8TDP1 164 aaKnown RBP13.46□□□□□ -0.25
HDAC11-208ENST00000416248 RRNAD1Q96FB5 475 aaKnown RBP13.46□□□□□ -0.25
HDAC11-208ENST00000416248 ATG101Q9BSB4 218 aa13.46□□□□□ -0.25
HDAC11-208ENST00000416248 GOLT1BQ9Y3E0 138 aa13.46□□□□□ -0.25
HDAC11-208ENST00000416248 NBDYA0A0U1RRE5 68 aa13.45□□□□□ -0.26
HDAC11-208ENST00000416248 M0QYG6 137 aa13.45□□□□□ -0.26
HDAC11-208ENST00000416248 TOMM40O96008 361 aa13.45□□□□□ -0.26
HDAC11-208ENST00000416248 RD3LP0DJH9 198 aa13.45□□□□□ -0.26
HDAC11-208ENST00000416248 DAD1P61803 113 aa13.45□□□□□ -0.26
HDAC11-208ENST00000416248 C2orf83Q53S99 150 aa13.45□□□□□ -0.26
HDAC11-208ENST00000416248 C1orf158Q8N1D5 194 aa13.45□□□□□ -0.26
HDAC11-208ENST00000416248 LINC00052Q96N35 136 aa13.45□□□□□ -0.26
HDAC11-208ENST00000416248 WDR12Q9GZL7 423 aaKnown RBP13.45□□□□□ -0.26
HDAC11-208ENST00000416248 SLC35B3Q9H1N7 401 aa13.45□□□□□ -0.26
HDAC11-208ENST00000416248 SCRT2Q9NQ03 307 aa13.45□□□□□ -0.26
HDAC11-208ENST00000416248 APOBP04114 4563 aaKnown RBP13.45□□□□□ -0.26
HDAC11-208ENST00000416248 LSM3P62310 102 aaKnown RBP13.44□□□□□ -0.26
HDAC11-208ENST00000416248 SP6Q3SY56 376 aa13.44□□□□□ -0.26
HDAC11-208ENST00000416248 LHFPL1Q86WI0 220 aa13.44□□□□□ -0.26
HDAC11-208ENST00000416248 OR4B1Q8NGF8 309 aa13.44□□□□□ -0.26
HDAC11-208ENST00000416248 OR52E5Q8NH55 327 aa13.44□□□□□ -0.26
HDAC11-208ENST00000416248 RNASE11Q8TAA1 199 aaKnown RBP13.44□□□□□ -0.26
HDAC11-208ENST00000416248 C7orf50Q9BRJ6 194 aaKnown RBP13.44□□□□□ -0.26
HDAC11-208ENST00000416248 HEYLQ9NQ87 328 aaPredicted RBP13.44□□□□□ -0.26
HDAC11-208ENST00000416248 NXPH3O95157 252 aa13.43□□□□□ -0.26
HDAC11-208ENST00000416248 UCP1P25874 307 aa13.43□□□□□ -0.26
HDAC11-208ENST00000416248 NUP62P37198 522 aaPredicted RBP13.43□□□□□ -0.26
HDAC11-208ENST00000416248 ID1P41134 155 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms