RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 LY96Q9Y6Y9 160 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 PCNX2A6NKB5 2137 aa9.8□□□□□ -0.84
PTPRF-205ENST00000414879 TRAV21A0A0B4J279 112 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 J3QKU1 62 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 PKIAP61925 76 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 IZUMO1RA6ND01 250 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 CGB1A6NKQ9 187 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 C19orf54Q5BKX5 351 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 ERASQ7Z444 233 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 OR8A1Q8NGG7 326 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 TMEM242Q9NWH2 141 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 SCGB1C2P0DMR2 95 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 FOLR2P14207 255 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 TEX38Q6PEX7 206 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 ZNF562Q6V9R5 426 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 BPESC1Q9GZL8 116 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 TMEM238LA0A1B0GVL6 79 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 A6NJY4 79 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 C1QTNF9P0C862 333 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 PRR30Q53SZ7 412 aaPredicted RBP9.79□□□□□ -0.84
PTPRF-205ENST00000414879 C9orf139Q6ZV77 190 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 VN1R17PQ8TDU5 208 aa9.79□□□□□ -0.84
PTPRF-205ENST00000414879 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.78□□□□□ -0.84
PTPRF-205ENST00000414879 PPBPP02775 128 aa9.78□□□□□ -0.84
PTPRF-205ENST00000414879 Q6ZR03 302 aa9.78□□□□□ -0.84
PTPRF-205ENST00000414879 HEATR1Q9H583 2144 aaKnown RBP9.78□□□□□ -0.84
PTPRF-205ENST00000414879 KLF2Q9Y5W3 355 aaPredicted RBP9.78□□□□□ -0.84
PTPRF-205ENST00000414879 RTTNQ86VV8 2226 aa9.78□□□□□ -0.84
PTPRF-205ENST00000414879 NUDT3O95989 172 aa9.78□□□□□ -0.84
PTPRF-205ENST00000414879 BEX4Q9NWD9 120 aaPredicted RBP9.78□□□□□ -0.84
PTPRF-205ENST00000414879 SCO2A0A1W2PP80 73 aa9.78□□□□□ -0.84
PTPRF-205ENST00000414879 IFITM10A6NMD0 228 aa9.78□□□□□ -0.84
PTPRF-205ENST00000414879 PMCHL2Q9BQD1 86 aa9.78□□□□□ -0.84
PTPRF-205ENST00000414879 IGHV2-70DA0A0C4DH43 119 aa9.77□□□□□ -0.84
PTPRF-205ENST00000414879 F2Z2F3 143 aa9.77□□□□□ -0.84
PTPRF-205ENST00000414879 TFF1P04155 84 aa9.77□□□□□ -0.84
PTPRF-205ENST00000414879 ZNF833PQ6ZTB9 187 aa9.77□□□□□ -0.84
PTPRF-205ENST00000414879 FER1L6-AS1Q8NA97 138 aa9.77□□□□□ -0.84
PTPRF-205ENST00000414879 TRGV11A0A075B6L2 103 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 C9JCJ5 164 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 RSPO1Q2MKA7 263 aaPredicted RBP9.77□□□□□ -0.85
PTPRF-205ENST00000414879 LDLRAD2Q5SZI1 272 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 ESPL1Q14674 2120 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 IGHV3-35A0A0C4DH35 117 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 H3BUX3 64 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 ATP5LO75964 103 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 SNRPCP09234 159 aaKnown RBP9.77□□□□□ -0.85
PTPRF-205ENST00000414879 SRIP30626 198 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 CDX1P47902 265 aaPredicted RBP9.77□□□□□ -0.85
PTPRF-205ENST00000414879 C15orf32Q32M92 178 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 MED12Q93074 2177 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 LINC00473A8K010 186 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 ATP5G3P48201 142 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 KRTAP27-1Q3LI81 207 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 LYPD2Q6UXB3 125 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 ATP5L2Q7Z4Y8 100 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 AP5S1Q9NUS5 200 aa9.77□□□□□ -0.85
PTPRF-205ENST00000414879 IGHV3-23P01764 117 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 BTF3P20290 206 aaKnown RBP9.76□□□□□ -0.85
PTPRF-205ENST00000414879 ZNF56Q15929 161 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 DMRTA2Q96SC8 542 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 HEATR5AQ86XA9 2040 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 LINC01559Q495D7 138 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 SIGLEC15Q6ZMC9 328 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 OR5AN1Q8NGI8 311 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 PSG8Q9UQ74 426 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 TRBV20OR9-2A0A075B6H5 130 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 TGIF2-C20orf24A0A0A6YYL0 155 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 H3BTX0 84 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 NDUFB8O95169 186 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 TOMM40O96008 361 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 IGHV3-11P01762 117 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 HSPB9Q9BQS6 159 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 RPL23P62829 140 aaKnown RBP9.76□□□□□ -0.85
PTPRF-205ENST00000414879 SRSF9Q13242 221 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRF-205ENST00000414879 PDE6HQ13956 83 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 SMIM12Q96EX1 92 aa9.76□□□□□ -0.85
PTPRF-205ENST00000414879 IGHV1-69DA0A0B4J2H0 117 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 IGHV1-69P01742 117 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 FAM110DQ8TAY7 271 aaPredicted RBP9.75□□□□□ -0.85
PTPRF-205ENST00000414879 ZNF524Q96C55 264 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 CYTL1Q9NRR1 136 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 COL4A3Q01955 1670 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 LOC389332A0A1B0GUA5 103 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 SAA4P35542 130 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 DUX3Q96PT4 197 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 FOSL1P15407 271 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 RASL11AQ6T310 242 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 STHQ8IWL8 128 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 RPRMLQ8N4K4 120 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 WFDC1Q9HC57 220 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 RNF114Q9Y508 228 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 RNASE2P10153 161 aaKnown RBP9.75□□□□□ -0.85
PTPRF-205ENST00000414879 LOXP28300 417 aaPredicted RBP9.75□□□□□ -0.85
PTPRF-205ENST00000414879 TMEM136Q6ZRR5 245 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 OR10W1Q8NGF6 305 aa9.75□□□□□ -0.85
PTPRF-205ENST00000414879 ITLN2Q8WWU7 325 aaPredicted RBP9.75□□□□□ -0.85
PTPRF-205ENST00000414879 IGHV3OR16-12A0A075B7B8 117 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 FAM181BA6NEQ2 426 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms