RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 GNB2P62879 340 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 LINC00303Q3SY05 128 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 C11orf71Q6IPW1 123 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 C19orf48Q6RUI8 117 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 PHF5AQ7RTV0 110 aaKnown RBP2.78□□□□□ -1.96
SF3B1-203ENST00000414174 FAM19A3Q7Z5A8 133 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 PCP2Q8IVA1 136 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 PRSS33Q8NF86 280 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 MRPL30Q8TCC3 161 aaKnown RBP2.78□□□□□ -1.96
SF3B1-203ENST00000414174 RBMXL1Q96E39 390 aaKnown RBP2.78□□□□□ -1.96
SF3B1-203ENST00000414174 PRELID3AQ96N28 172 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 AMELYQ99218 206 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 PLEKHA3Q9HB20 300 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 AIG1Q9NVV5 245 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 ADGBQ8N7X0 1667 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 IQGAP3Q86VI3 1631 aa2.78□□□□□ -1.96
SF3B1-203ENST00000414174 CEP170BQ9Y4F5 1589 aaPredicted RBP2.78□□□□□ -1.96
SF3B1-203ENST00000414174 ZNF638Q14966 1978 aaKnown RBP2.78□□□□□ -1.97
SF3B1-203ENST00000414174 PXDNQ92626 1479 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 TRAV41A0A0B4J266 112 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 TRBV27A0A0K0K1C4 114 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 TRBV7-7A0A0K0K1E9 115 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 MUC21A0A140T8X8 626 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 LOC389332A0A1B0GUA5 103 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 KANTRA0A1W2PQU2 76 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 RBMY1BA6NDE4 496 aaKnown RBP2.77□□□□□ -1.97
SF3B1-203ENST00000414174 RBMY1EA6NEQ0 496 aaKnown RBP2.77□□□□□ -1.97
SF3B1-203ENST00000414174 FAM24AA6NFZ4 105 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 ZNF860A6NHJ4 632 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 C12orf77C9JDV5 145 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 K7N7A8 449 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 M0R378 163 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 LST1O00453 97 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 SOCS2O14508 198 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 ZNHIT1O43257 154 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 NDUFB3O43676 98 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 CST7O76096 145 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 FSTL3O95633 263 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 TRBV12-3P01733 135 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 IL5P05113 134 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 GYPBP06028 91 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 RBMY1DP0C7P1 496 aaKnown RBP2.77□□□□□ -1.97
SF3B1-203ENST00000414174 RBMY1A1P0DJD3 496 aaKnown RBP2.77□□□□□ -1.97
SF3B1-203ENST00000414174 TPT1P13693 172 aaKnown RBP2.77□□□□□ -1.97
SF3B1-203ENST00000414174 MP68P56378 58 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 MRPS36P82909 103 aaKnown RBP2.77□□□□□ -1.97
SF3B1-203ENST00000414174 IGFBP7Q16270 282 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 FBXL19-AS1Q494R0 122 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 MPV17L2Q567V2 206 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 CLLU1OSQ5K130 101 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 MUC21Q5SSG8 566 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 FAM219BQ5XKK7 198 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 ZNF322Q6U7Q0 402 aaPredicted RBP2.77□□□□□ -1.97
SF3B1-203ENST00000414174 TMEM91Q6ZNR0 172 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 LCA10Q71F78 164 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 BPIFA4PQ86YQ2 179 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 Q8N976 141 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 NEXN-AS1Q8NBZ9 246 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 WFDC11Q8NEX6 87 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 RFESDQ8TAC1 157 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 MYOZ3Q8TDC0 251 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 DCANP1Q8TF63 244 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 LRRC29Q8WV35 223 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 PPDPFLQ8WWR9 84 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 LSM10Q969L4 123 aaKnown RBP2.77□□□□□ -1.97
SF3B1-203ENST00000414174 TOMM6Q96B49 74 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 LYZL4Q96KX0 146 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 SLC35B3Q9H1N7 401 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 SPRR3Q9UBC9 169 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 XCL2Q9UBD3 114 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 CKLFQ9UBR5 152 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 INSL5Q9Y5Q6 135 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 SELENOKQ9Y6D0 94 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 CLTCL1P53675 1640 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 HECW1Q76N89 1606 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 CHD4Q14839 1912 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 CDK5RAP2Q96SN8 1893 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 KIAA0586Q9BVV6 1533 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 ITGB4P16144 1822 aa2.77□□□□□ -1.97
SF3B1-203ENST00000414174 EDC4Q6P2E9 1401 aaKnown RBP2.76□□□□□ -1.97
SF3B1-203ENST00000414174 SPHKAPQ2M3C7 1700 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 SHANK3Q9BYB0 1731 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 TTC3P53804 2025 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 PTPN23Q9H3S7 1636 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 TRAV9-1A0A075B6T8 112 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 TRAV9-2A0A087WT02 112 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 A0A0G2JND7 137 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 hDV102S1A0JD36 115 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 GRIFINA4D1Z8 144 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 RBAKDNA6NC62 111 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 DPRXA6NFQ7 191 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 EPOPA6NHQ4 379 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 A8MUN3 132 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 C4orf51C9J302 202 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 C17orf112F2Z3M2 114 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 SYS1-DBNDD2H3BUS1 97 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 M0R129 80 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 M0R381 172 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 SYNGR2O43760 224 aa2.76□□□□□ -1.97
SF3B1-203ENST00000414174 ZNF73O43830 326 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms