RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	SLC25A31	Q9H0C2	315 aa		10.08	□□□□□ -0.8
SF1-206	ENST00000413725	OR5AC2	Q9NZP5	309 aa		10.08	□□□□□ -0.8
SF1-206	ENST00000413725	PEMT	Q9UBM1	199 aa		10.08	□□□□□ -0.8
SF1-206	ENST00000413725	IGHV3-35	A0A0C4DH35	117 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	ZNF320	A2RRD8	509 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	SMCO3	A2RU48	225 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	PMS2P5	A8MQ11	134 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725		H0YIZ8	118 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	LGALS9	O00182	355 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	NDUFA4	O00483	81 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	CCNK	O75909	580 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	CST7	O76096	145 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	SULT1A1	P50225	295 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	HBG1	P69891	147 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	HBG2	P69892	147 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	DLK1	P80370	383 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	AKR1C1	Q04828	323 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	ZNF600	Q6ZNG1	722 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	REC114	Q7Z4M0	266 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	OR9G4	Q8NGQ1	327 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	MBD2	Q9UBB5	411 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	CMYA5	Q8N3K9	4069 aa		10.07	□□□□□ -0.8
SF1-206	ENST00000413725	IGSF23	A1L1A6	192 aa		10.06	□□□□□ -0.8
SF1-206	ENST00000413725	ZFP92	A6NM28	416 aa		10.06	□□□□□ -0.8
SF1-206	ENST00000413725	SEC14L6	B5MCN3	397 aa		10.06	□□□□□ -0.8
SF1-206	ENST00000413725	FNDC10	F2Z333	226 aa		10.06	□□□□□ -0.8
SF1-206	ENST00000413725	FABP1	P07148	127 aa		10.06	□□□□□ -0.8
SF1-206	ENST00000413725	IGLC1	P0CG04	106 aa		10.06	□□□□□ -0.8
SF1-206	ENST00000413725	SLC38A11	Q08AI6	406 aa		10.06	□□□□□ -0.8
SF1-206	ENST00000413725	C9orf66	Q5T8R8	295 aa		10.06	□□□□□ -0.8
SF1-206	ENST00000413725	TMEM217	Q8N7C4	229 aa		10.06	□□□□□ -0.8
SF1-206	ENST00000413725	RNF126	Q9BV68	326 aa		10.06	□□□□□ -0.8
SF1-206	ENST00000413725	GGACT	Q9BVM4	153 aa		10.06	□□□□□ -0.8
SF1-206	ENST00000413725		A8MWP6	167 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	YIF1A	O95070	293 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	IGKV1-17	P01599	117 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	S100A11	P31949	105 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	YPEL3	P61236	119 aa	Predicted RBP	10.05	□□□□□ -0.8
SF1-206	ENST00000413725	BAX	Q07812	192 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	TIGIT	Q495A1	244 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	TMEM144	Q7Z5S9	345 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	HAPLN4	Q86UW8	402 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	LILRB2	Q8N423	598 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	THAP8	Q8NA92	274 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	OR2T35	Q8NGX2	323 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	TMEM190	Q8WZ59	177 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	C20orf24	Q9BUV8	137 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	UFC1	Q9Y3C8	167 aa		10.05	□□□□□ -0.8
SF1-206	ENST00000413725	TRAV14DV4	A0A0A6YYC5	116 aa		10.04	□□□□□ -0.8
SF1-206	ENST00000413725	SAP30	O75446	220 aa		10.04	□□□□□ -0.8
SF1-206	ENST00000413725	LYL1	P12980	280 aa		10.04	□□□□□ -0.8
SF1-206	ENST00000413725	IGLL1	P15814	213 aa		10.04	□□□□□ -0.8
SF1-206	ENST00000413725	NUP62	P37198	522 aa	Predicted RBP	10.04	□□□□□ -0.8
SF1-206	ENST00000413725	INSL3	P51460	131 aa		10.04	□□□□□ -0.8
SF1-206	ENST00000413725	ELL	P55199	621 aa	Predicted RBP	10.04	□□□□□ -0.8
SF1-206	ENST00000413725	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.04	□□□□□ -0.8	3e-6	■□□□□ 9.5
SF1-206	ENST00000413725	ARL16	Q0P5N6	197 aa		10.04	□□□□□ -0.8
SF1-206	ENST00000413725	UNQ9165/PRO28630	Q6UXU0	137 aa		10.04	□□□□□ -0.8
SF1-206	ENST00000413725		Q8WTZ3	238 aa		10.04	□□□□□ -0.8
SF1-206	ENST00000413725	TRGV9	Q99603	122 aa		10.04	□□□□□ -0.8
SF1-206	ENST00000413725	GINS3	Q9BRX5	216 aa		10.04	□□□□□ -0.8
SF1-206	ENST00000413725	NPVF	Q9HCQ7	196 aa		10.04	□□□□□ -0.8
SF1-206	ENST00000413725	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
SF1-206	ENST00000413725	hCG_2014768	A0A024R1R8	64 aa		10.03	□□□□□ -0.8
SF1-206	ENST00000413725	C2orf70	A6NJV1	201 aa		10.03	□□□□□ -0.8
SF1-206	ENST00000413725	TOMM40	O96008	361 aa		10.03	□□□□□ -0.8
SF1-206	ENST00000413725	RD3L	P0DJH9	198 aa		10.03	□□□□□ -0.8
SF1-206	ENST00000413725	RPL12	P30050	165 aa	Known RBP	10.03	□□□□□ -0.8
SF1-206	ENST00000413725	ATP6V1F	Q16864	119 aa		10.03	□□□□□ -0.8
SF1-206	ENST00000413725	TOMM20L	Q6UXN7	152 aa		10.03	□□□□□ -0.8
SF1-206	ENST00000413725	CHAC2	Q8WUX2	184 aa		10.03	□□□□□ -0.8
SF1-206	ENST00000413725	TMEM147	Q9BVK8	224 aa		10.03	□□□□□ -0.8
SF1-206	ENST00000413725	DAZ1	Q9NQZ3	744 aa	Known RBP	10.03	□□□□□ -0.8
SF1-206	ENST00000413725	UQCC1	Q9NVA1	299 aa		10.03	□□□□□ -0.8
SF1-206	ENST00000413725	NOTCH1	P46531	2555 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	IGKV1D-37	A0A075B6S9	117 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	IGHV3OR16-8	A0A075B7F1	116 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	TMEM213	A2RRL7	107 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725		K7EMT4	169 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	NHLH2	Q02577	135 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	TM4SF20	Q53R12	229 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	TEPP	Q6URK8	271 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	OR51G1	Q8NGK1	321 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	OR5C1	Q8NGR4	320 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	DYNLRB2	Q8TF09	96 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	MARC2	Q969Z3	335 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	SIGLEC8	Q9NYZ4	499 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	HSPB11	Q9Y547	144 aa		10.02	□□□□□ -0.81
SF1-206	ENST00000413725	IGKV1OR2-108	A0A075B7D4	117 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	FXYD6-FXYD2	A0A087WZ82	144 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	UBE2L5P	A0A1B0GUS4	154 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	CFD	P00746	253 aa	Predicted RBP	10.01	□□□□□ -0.81
SF1-206	ENST00000413725	CSN3	P07498	182 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	PSG1	P11464	419 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	FOLR2	P14207	255 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	CBLN1	P23435	193 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	BMI1	P35226	326 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	ZNF90	Q03938	601 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	RAB31	Q13636	194 aa		10.01	□□□□□ -0.81
SF1-206	ENST00000413725	VWC2	Q2TAL6	325 aa		10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms