RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 HIST1H1EP10412 219 aaKnown RBP7.04□□□□□ -1.28
SYNE1-211ENST00000413186 BSXQ3C1V8 233 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 Q5BKY6 102 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 ZNF843Q8N446 348 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 MYOZ3Q8TDC0 251 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 COQ2Q96H96 371 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 METRNQ9UJH8 293 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 U3KQE9 123 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 RELNP78509 3460 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 IGHV3OR16-10A0A075B7F0 116 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 TMSB15BA0A087X1C1 80 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 HTN1P15515 57 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 RELBQ01201 579 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 COX19Q49B96 90 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 OCIAD2Q56VL3 154 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 ZFAND6Q6FIF0 208 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 UNQ5815/PRO19632Q6UWF5 114 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 WDR86Q86TI4 376 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 OR4A5Q8NH83 315 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 LHFPL5Q8TAF8 219 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 C1orf147Q96MC9 270 aaPredicted RBP7.04□□□□□ -1.28
SYNE1-211ENST00000413186 PRELID3AQ96N28 172 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 KAAG1Q9UBP8 84 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 SPCS1Q9Y6A9 102 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 SAA2-SAA4A0A096LPE2 208 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 ATP5LO75964 103 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 SAA2P0DJI9 122 aaPredicted RBP7.04□□□□□ -1.28
SYNE1-211ENST00000413186 P2RX4Q99571 388 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 PMCHL2Q9BQD1 86 aa7.04□□□□□ -1.28
SYNE1-211ENST00000413186 MRPL20Q9BYC9 149 aaKnown RBP7.04□□□□□ -1.28
SYNE1-211ENST00000413186 NPIPB11E5RHQ5 1161 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 HSPB1P04792 205 aaKnown RBP7.03□□□□□ -1.28
SYNE1-211ENST00000413186 DANCRP0C864 163 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 PRTN3P24158 256 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 CIRBPQ14011 172 aaKnown RBP7.03□□□□□ -1.28
SYNE1-211ENST00000413186 C9orf153Q5TBE3 101 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 Q8NFD4 153 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 HS3ST6Q96QI5 342 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 TCF19Q9Y242 345 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 IGHV2-26A0A0B4J1V2 119 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 ZNF273Q14593 569 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 LY6EQ16553 131 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 SLC25A34Q6PIV7 304 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 LYPD2Q6UXB3 125 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 SLC35E3Q7Z769 313 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 MBNL3Q9NUK0 354 aaKnown RBP7.03□□□□□ -1.28
SYNE1-211ENST00000413186 MED13LQ71F56 2210 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 KIAA2026Q5HYC2 2103 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 IGKV1D-33P01593 117 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 IGKV1-33P01594 117 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 TNFRSF9Q07011 255 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 LY6G6FQ5SQ64 297 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 OR5R1Q8NH85 324 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 ALKBH7Q9BT30 221 aaPredicted RBP7.03□□□□□ -1.28
SYNE1-211ENST00000413186 TIMM9Q9Y5J7 89 aa7.03□□□□□ -1.28
SYNE1-211ENST00000413186 TRAV14DV4A0A0A6YYC5 116 aa7.02□□□□□ -1.28
SYNE1-211ENST00000413186 FXYD3Q14802 87 aa7.02□□□□□ -1.28
SYNE1-211ENST00000413186 GPHA2Q96T91 129 aa7.02□□□□□ -1.28
SYNE1-211ENST00000413186 TNRC6AQ8NDV7 1962 aaKnown RBP7.02□□□□□ -1.29
SYNE1-211ENST00000413186 IGKV1D-13A0A0B4J2D9 117 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 C17orf98A8MV24 154 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 MSMBP08118 114 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 IGKV1-13P0DP09 117 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 HIST1H1BP16401 226 aaKnown RBP7.02□□□□□ -1.29
SYNE1-211ENST00000413186 MAS1LP35410 378 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 RPL30P62888 115 aaKnown RBP7.02□□□□□ -1.29
SYNE1-211ENST00000413186 RBM3P98179 157 aaKnown RBP7.02□□□□□ -1.29
SYNE1-211ENST00000413186 TEPPQ6URK8 271 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 DTX2Q86UW9 622 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 OR4X2Q8NGF9 303 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 CLDND2Q8NHS1 167 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 RNF5Q99942 180 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 MALRD1Q5VYJ5 2156 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 IGKV1D-8A0A087WSZ0 117 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 TRAV40A0A0B4J280 105 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 RNF222A6NCQ9 220 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 DIRC3C9JPN6 131 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 FAM71F2Q6NXP2 309 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 MPTX1A8MV57 137 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 SELENOTP62341 195 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 HLA-DRB5Q30154 266 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 VMO1Q7Z5L0 202 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 C5orf17Q8NAS9 161 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 GGACTQ9BVM4 153 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 PARLQ9H300 379 aa7.02□□□□□ -1.29
SYNE1-211ENST00000413186 FAM74A7A6NL05 159 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 NBR2O15453 112 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 CXorf1O96002 111 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 ADMP35318 185 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 HOXA4Q00056 320 aaPredicted RBP7.01□□□□□ -1.29
SYNE1-211ENST00000413186 CXorf66Q5JRM2 361 aaPredicted RBP7.01□□□□□ -1.29
SYNE1-211ENST00000413186 SPTSSBQ8NFR3 76 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 MGST2Q99735 147 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 ANAPC10Q9UM13 185 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 A8MXK9 166 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 PHLDA1Q8WV24 401 aaPredicted RBP7.01□□□□□ -1.29
SYNE1-211ENST00000413186 C18orf12Q96KH6 178 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 MRPL16Q9NX20 251 aaKnown RBP7.01□□□□□ -1.29
SYNE1-211ENST00000413186 WNT2P09544 360 aa7.01□□□□□ -1.29
SYNE1-211ENST00000413186 AWAT1Q58HT5 328 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms