RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CYP2G1PQ6ZSU1 146 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 SSX7Q7RTT5 188 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 COMMD7Q86VX2 200 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 FAM223AQ8IWN6 122 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 Q8N2B8 174 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 NECAP1Q8NC96 275 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 BPIFCQ8NFQ6 507 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 VN1R17PQ8TDU5 208 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 RCC1LQ96I51 464 aaKnown RBP5.19□□□□□ -1.58
VPS41-204ENST00000413141 TRGV9Q99603 122 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 PRSS22Q9GZN4 317 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 RPRMQ9NS64 109 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 ZNF355PQ9NSJ1 428 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 MED9Q9NWA0 146 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 C21orf62Q9NYP8 219 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 S4R3C0 116 aa5.19□□□□□ -1.58
VPS41-204ENST00000413141 ANK3Q12955 4377 aaKnown RBP5.19□□□□□ -1.58
VPS41-204ENST00000413141 SEC14L6B5MCN3 397 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 INAFM1C9JVW0 142 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 TEX46H3BTG2 121 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 GNG7O60262 68 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 IGKV1-17P01599 117 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 IGLV1-40P01703 118 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 IGHV3-23P01764 117 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 RNASE1P07998 156 aaKnown RBP5.18□□□□□ -1.58
VPS41-204ENST00000413141 GATA2P23769 480 aaPredicted RBP5.18□□□□□ -1.58
VPS41-204ENST00000413141 FCGR2BP31994 310 aaPredicted RBP5.18□□□□□ -1.58
VPS41-204ENST00000413141 NPBWR1P48145 328 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 CDC34P49427 236 aaPredicted RBP5.18□□□□□ -1.58
VPS41-204ENST00000413141 MFAP4P55083 255 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 TPPP2P59282 170 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 HILS1P60008 231 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 SELENOTP62341 195 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 TIGITQ495A1 244 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 Q56UQ5 140 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 FAM122CQ6P4D5 195 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 Q71RC1 249 aaPredicted RBP5.18□□□□□ -1.58
VPS41-204ENST00000413141 SLC7A5P1Q8MH63 180 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 RPP25LQ8N5L8 163 aaKnown RBP5.18□□□□□ -1.58
VPS41-204ENST00000413141 OR10G4Q8NGN3 311 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 OR10G9Q8NGN4 311 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 OR10G7Q8NGN6 311 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 LYPD6BQ8NI32 183 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 ZNF502Q8TBZ5 544 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 EEF1AKMT3Q96AZ1 226 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 CCDC140Q96MF4 163 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 MS4A10Q96PG2 267 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 HRH4Q9H3N8 390 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 GSX1Q9H4S2 264 aaPredicted RBP5.18□□□□□ -1.58
VPS41-204ENST00000413141 SLC25A22Q9H936 323 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 PFDN2Q9UHV9 154 aa5.18□□□□□ -1.58
VPS41-204ENST00000413141 CUBNO60494 3623 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 NSD1Q96L73 2696 aaPredicted RBP5.17□□□□□ -1.58
VPS41-204ENST00000413141 TRAV30A0A087WSZ9 112 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 TRAV1-1A0A0B4J248 108 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 CTXND1A0A1B0GTU2 59 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 A0A1B0GV50 99 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 TMEM89A2RUT3 159 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 PSMB11A5LHX3 300 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 MAP1LC3B2A6NCE7 125 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 FAM181BA6NEQ2 426 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 OR2T8A6NH00 312 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 CYSRT1A8MQ03 144 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 ATP6V1G1O75348 118 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 SCGB2A1O75556 95 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 EIF3GO75821 320 aaKnown RBP eCLIP5.17□□□□□ -1.58
VPS41-204ENST00000413141 TOMM40O96008 361 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 IGHG4P01861 327 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 HBE1P02100 147 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 TRGV3P03979 118 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 FABP1P07148 127 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 H2AFB1P0C5Y9 115 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 OR5G3P0C626 314 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 PF4V1P10720 104 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 PSMB8P28062 276 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 GPR183P32249 361 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 RPL15P61313 204 aaKnown RBP5.17□□□□□ -1.58
VPS41-204ENST00000413141 ATP5G2Q06055 141 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 SPSB3Q6PJ21 355 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 IL34Q6ZMJ4 242 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 ZNF418Q8TF45 676 aaPredicted RBP5.17□□□□□ -1.58
VPS41-204ENST00000413141 MBD3L1Q8WWY6 194 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 ATP6V0BQ99437 205 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 TXN2Q99757 166 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 ACTR3CQ9C0K3 210 aaPredicted RBP5.17□□□□□ -1.58
VPS41-204ENST00000413141 MAP1LC3BQ9GZQ8 125 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 HIVEP1P15822 2718 aa5.17□□□□□ -1.58
VPS41-204ENST00000413141 HIVEP2P31629 2446 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 SETXQ7Z333 2677 aaKnown RBP5.16□□□□□ -1.58
VPS41-204ENST00000413141 TRBV7-1A0A0A6YYK4 115 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 NUDT19A8MXV4 375 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 HMGB3O15347 200 aaKnown RBP5.16□□□□□ -1.58
VPS41-204ENST00000413141 COX7A2P2O60397 106 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 PSG1P11464 419 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 ADMP35318 185 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 FGF8P55075 233 aaPredicted RBP5.16□□□□□ -1.58
VPS41-204ENST00000413141 PLP1P60201 277 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 YPEL3P61236 119 aaPredicted RBP5.16□□□□□ -1.58
VPS41-204ENST00000413141 RHOBP62745 196 aa5.16□□□□□ -1.58
VPS41-204ENST00000413141 SLC35B1P78383 322 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms