RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 TRGV9Q99603 122 aa9.21□□□□□ -0.94
TRAFD1-202ENST00000412615 IGLV2-8P01709 118 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 COX7A1P24310 79 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 KLRB1Q12918 225 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 OR8I2Q8N0Y5 310 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 TMEM116Q8NCL8 245 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 RNF5Q99942 180 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 MRPL18Q9H0U6 180 aaKnown RBP9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 RNASE7Q9H1E1 156 aaKnown RBP9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 SMG1Q96Q15 3661 aaKnown RBP9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 MGST1P10620 155 aaKnown RBP9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 MFAP2P55001 183 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 IBA57Q5T440 356 aaKnown RBP9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 ZNF600Q6ZNG1 722 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 FXYD5Q96DB9 178 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 GNB1LQ9BYB4 327 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 RAB1BQ9H0U4 201 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 SPTBN2O15020 2390 aa9.2□□□□□ -0.94
TRAFD1-202ENST00000412615 C22orf46C9J442 243 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 FCN1O00602 326 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 LIPFP07098 398 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 ORM2P19652 201 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 IER3P46695 156 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 CX3CL1P78423 397 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 PAX2Q02962 417 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 PRB3Q04118 309 aaPredicted RBP9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 COX19Q49B96 90 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 FAM209BQ5JX69 171 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 ADGRG4Q8IZF6 3080 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 MOSP00540 346 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 DEFA6Q01524 100 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 CFAP161Q6P656 301 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 ZNF329Q86UD4 541 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 TMEM256Q8N2U0 113 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 LY6G5BQ8NDX9 201 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 OR1B1Q8NGR6 318 aa9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 F11RQ9Y624 299 aaKnown RBP9.19□□□□□ -0.94
TRAFD1-202ENST00000412615 SNURFLB1AK76 121 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 PEX7O00628 323 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 GATCO43716 136 aaKnown RBP9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 MT-ND6P03923 174 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 SFTPCP11686 197 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 CRISP2P16562 243 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 WDR73Q6P4I2 378 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 ONECUT1Q9UBC0 465 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 RAXQ9Y2V3 346 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 POLEQ07864 2286 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 ZNF705GA8MUZ8 300 aaPredicted RBP9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 LY6LH3BQJ8 138 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 HYPMO75409 117 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 APELAP0DMC3 54 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 FXYD3Q14802 87 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 TIMD4Q96H15 378 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 FBXL15Q9H469 300 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 SERTAD4Q9NUC0 356 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 TEX22C9J3V5 150 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 PLGLAQ15195 96 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 IQCJQ1A5X6 159 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 RUSC1-AS1Q66K80 236 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 SRSF12Q8WXF0 261 aaKnown RBP9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 LINC00479Q96M42 142 aa9.18□□□□□ -0.94
TRAFD1-202ENST00000412615 SMIM27A0A1W2PRY6 76 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 GRIFINA4D1Z8 144 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 MYCNOSP40205 109 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 RANP62826 216 aaKnown RBP9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 ADORA2A-AS1P86434 159 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 BAGE2Q86Y30 109 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 CMTM2Q8TAZ6 248 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 SRSF8Q9BRL6 282 aaKnown RBP9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 PRO1933Q9H354 126 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 PTPRQQ9UMZ3 2332 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 A0A1B0GUS0 222 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 HTR1DP28221 377 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 DDTP30046 118 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 PLP1P60201 277 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 PAFAH1B2P68402 229 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 C19orf35Q6ZS72 473 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 FAM231DQ6ZW35 169 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 CBLN4Q9NTU7 201 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 NAT8BQ9UHF3 227 aa9.17□□□□□ -0.94
TRAFD1-202ENST00000412615 MALRD1Q5VYJ5 2156 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 IGHV3-21A0A0B4J1V1 117 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 NUPR1O60356 82 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 NBEAP1P0C6P0 100 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 FRMD6-AS1P0C7T7 363 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 Q0VG73 95 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 TPTE2P1Q5T6R2 138 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 NHLRC2Q8NBF2 726 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 CHRDL1Q9BU40 450 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 EPDR1Q9UM22 224 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 PGPA6NDG6 321 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 TIMM23O14925 209 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 SPINK4O60575 86 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 ESDP10768 282 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 TCL1AP56279 114 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 CDSNQ15517 529 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 TMEM183BQ1AE95 376 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 MS4A10Q96PG2 267 aa9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 COL25A1Q9BXS0 654 aaPredicted RBP9.16□□□□□ -0.94
TRAFD1-202ENST00000412615 DPM3Q9P2X0 92 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms