RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ZNF207O43670 478 aaKnown RBP9.91□□□□□ -0.82
HDAC8-210ENST00000412342 SSSCA1O60232 199 aa9.91□□□□□ -0.82
HDAC8-210ENST00000412342 PRAF2O60831 178 aa9.91□□□□□ -0.82
HDAC8-210ENST00000412342 SCAF4O95104 1147 aaKnown RBP9.91□□□□□ -0.82
HDAC8-210ENST00000412342 MBPP02686 304 aaPredicted RBP9.91□□□□□ -0.82
HDAC8-210ENST00000412342 IFNA4P05014 189 aa9.91□□□□□ -0.82
HDAC8-210ENST00000412342 GPX4P36969 197 aaPredicted RBP9.91□□□□□ -0.82
HDAC8-210ENST00000412342 OR1S2Q8NGQ3 325 aa9.91□□□□□ -0.82
HDAC8-210ENST00000412342 NPIPB3Q92617 1050 aa9.91□□□□□ -0.82
HDAC8-210ENST00000412342 SMIM8Q96KF7 97 aa9.91□□□□□ -0.82
HDAC8-210ENST00000412342 C11orf1Q9H5F2 150 aa9.91□□□□□ -0.82
HDAC8-210ENST00000412342 PUS1Q9Y606 427 aaKnown RBP eCLIP9.91□□□□□ -0.82
HDAC8-210ENST00000412342 IGKV1D-37A0A075B6S9 117 aa9.9□□□□□ -0.82
HDAC8-210ENST00000412342 IGHV7-4-1A0A0J9YVY3 117 aa9.9□□□□□ -0.82
HDAC8-210ENST00000412342 OR10J1P30954 320 aa9.9□□□□□ -0.82
HDAC8-210ENST00000412342 RAB11AP62491 216 aa9.9□□□□□ -0.82
HDAC8-210ENST00000412342 GAMTQ14353 236 aa9.9□□□□□ -0.82
HDAC8-210ENST00000412342 SPANXN5Q5MJ07 72 aa9.9□□□□□ -0.82
HDAC8-210ENST00000412342 TMEM14EPQ6UXP3 125 aa9.9□□□□□ -0.82
HDAC8-210ENST00000412342 WDR89Q96FK6 387 aaPredicted RBP9.9□□□□□ -0.82
HDAC8-210ENST00000412342 ACY3Q96HD9 319 aa9.9□□□□□ -0.82
HDAC8-210ENST00000412342 C2orf50Q96LR7 162 aa9.9□□□□□ -0.82
HDAC8-210ENST00000412342 GPN1Q9HCN4 374 aaPredicted RBP9.9□□□□□ -0.82
HDAC8-210ENST00000412342 GSKIPQ9P0R6 139 aa9.9□□□□□ -0.82
HDAC8-210ENST00000412342 SMPXQ9UHP9 88 aa9.9□□□□□ -0.82
HDAC8-210ENST00000412342 C7orf66A4D0T2 115 aa9.89□□□□□ -0.83
HDAC8-210ENST00000412342 YIF1AO95070 293 aa9.89□□□□□ -0.83
HDAC8-210ENST00000412342 SCGB1D2O95969 90 aa9.89□□□□□ -0.83
HDAC8-210ENST00000412342 YPEL3P61236 119 aaPredicted RBP9.89□□□□□ -0.83
HDAC8-210ENST00000412342 RPP30P78346 268 aaKnown RBP9.89□□□□□ -0.83
HDAC8-210ENST00000412342 DEFB121Q5J5C9 76 aa9.89□□□□□ -0.83
HDAC8-210ENST00000412342 RAB40CQ96S21 281 aa9.89□□□□□ -0.83
HDAC8-210ENST00000412342 PSENENQ9NZ42 101 aa9.89□□□□□ -0.83
HDAC8-210ENST00000412342 STRAPQ9Y3F4 350 aaKnown RBP9.89□□□□□ -0.83
HDAC8-210ENST00000412342 IGKV1OR2-108A0A075B7D4 117 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 TRAV14DV4A0A0A6YYC5 116 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 TRAV25A0A0B4J276 109 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 C5orf51A6NDU8 294 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 FAM25EA8MYX2 175 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 K7EPK0 472 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 CHEK1O14757 476 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 TSC22D2O75157 780 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 CCNKO75909 580 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 PTTG1O95997 202 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 TOMM40O96008 361 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 APOHP02749 345 aaPredicted RBP9.88□□□□□ -0.83
HDAC8-210ENST00000412342 TAS2R30P59541 319 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 DCTN2Q13561 401 aaKnown RBP9.88□□□□□ -0.83
HDAC8-210ENST00000412342 GSG1LQ6UXU4 331 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 THAP8Q8NA92 274 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 SLC35E1Q96K37 410 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 GINS3Q9BRX5 216 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 RHPN1-AS1Q9BWJ2 59 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 VSIRQ9H7M9 311 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 SMAD5-AS1Q9Y6J3 95 aa9.88□□□□□ -0.83
HDAC8-210ENST00000412342 COL7A1Q02388 2944 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 IGHV3-49A0A0A0MS15 119 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 A8MZ25 164 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 SCGB2A1O75556 95 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 CD7P09564 240 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 FAM90A2PQ658T7 463 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 ACOT7LQ6ZUV0 252 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 LILRB2Q8N423 598 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 ST8SIA2Q92186 375 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 RNF2Q99496 336 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 B9D2Q9BPU9 175 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 C19orf73Q9NVV2 129 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 PAIP2BQ9ULR5 123 aaKnown RBP9.87□□□□□ -0.83
HDAC8-210ENST00000412342 U3KQE9 123 aa9.87□□□□□ -0.83
HDAC8-210ENST00000412342 IGHV3OR16-13A0A075B7E8 117 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 IGHV3-74A0A0B4J1X5 117 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 GOSR2O14653 212 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 TSPAN4O14817 238 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 SIX6O95475 246 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 METTL15P1P0C7V9 234 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 PSG1P11464 419 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 CRYBB3P26998 211 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 ZNF90Q03938 601 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 ARL16Q0P5N6 197 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 RAB32Q13637 225 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 USF2Q15853 346 aaPredicted RBP9.86□□□□□ -0.83
HDAC8-210ENST00000412342 GUCA2BQ16661 112 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 Q8WTZ3 238 aa9.86□□□□□ -0.83
HDAC8-210ENST00000412342 LSM5Q9Y4Y9 91 aaKnown RBP9.86□□□□□ -0.83
HDAC8-210ENST00000412342 IGHV4-30-4P0DP06 118 aa9.85□□□□□ -0.83
HDAC8-210ENST00000412342 H2BFSP57053 126 aa9.85□□□□□ -0.83
HDAC8-210ENST00000412342 CD81P60033 236 aa9.85□□□□□ -0.83
HDAC8-210ENST00000412342 GTSCR1Q86UQ5 136 aa9.85□□□□□ -0.83
HDAC8-210ENST00000412342 TRGV9Q99603 122 aa9.85□□□□□ -0.83
HDAC8-210ENST00000412342 SPAG8Q99932 426 aaPredicted RBP9.85□□□□□ -0.83
HDAC8-210ENST00000412342 NEURL2Q9BR09 285 aa9.85□□□□□ -0.83
HDAC8-210ENST00000412342 ZFP92A6NM28 416 aa9.84□□□□□ -0.83
HDAC8-210ENST00000412342 IL4P05112 153 aa9.84□□□□□ -0.83
HDAC8-210ENST00000412342 FRMD6-AS1P0C7T7 363 aa9.84□□□□□ -0.83
HDAC8-210ENST00000412342 RD3LP0DJH9 198 aa9.84□□□□□ -0.83
HDAC8-210ENST00000412342 DLK1P80370 383 aa9.84□□□□□ -0.83
HDAC8-210ENST00000412342 LAMTOR1Q6IAA8 161 aa9.84□□□□□ -0.83
HDAC8-210ENST00000412342 OR8G2PQ6IF36 304 aa9.84□□□□□ -0.83
HDAC8-210ENST00000412342 RBPMS2Q6ZRY4 209 aaKnown RBP9.84□□□□□ -0.83
HDAC8-210ENST00000412342 METTL26Q96S19 204 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms