RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 LDLRAD2Q5SZI1 272 aa5.96□□□□□ -1.45
CXCR4-202ENST00000409817 MIR17HGQ75NE6 70 aa5.96□□□□□ -1.45
CXCR4-202ENST00000409817 TCEAL7Q9BRU2 100 aa5.96□□□□□ -1.45
CXCR4-202ENST00000409817 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.96□□□□□ -1.45
CXCR4-202ENST00000409817 IGKV1D-37A0A075B6S9 117 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 C9JCJ5 164 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 H7BYZ3 331 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 NDUFS7O75251 213 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 TOX4O94842 621 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 CNIH1O95406 144 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 AMY1AP04745 511 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 S100PP25815 95 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 PLP1P60201 277 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 UBE2G2P60604 165 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 MLANAQ16655 118 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 C5orf64Q2M2E5 130 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 C10orf113Q5VZT2 155 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 SPATA31B1PQ5VZV4 182 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 ZNF562Q6V9R5 426 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 TMEM37Q8WXS4 190 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 OR5B12Q96R08 314 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 BPESC1Q9GZL8 116 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 TNFRSF19Q9NS68 423 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 C1RLQ9NZP8 487 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 HILPDAQ9Y5L2 63 aa5.96□□□□□ -1.46
CXCR4-202ENST00000409817 OR7C2O60412 319 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 NDUFB4O95168 129 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 REG1AP05451 166 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 S100A6P06703 90 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 FAM106CPP0CH98 169 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 NPPCP23582 126 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 BRS3P32247 399 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 SSBP2P81877 361 aaPredicted RBP5.95□□□□□ -1.46
CXCR4-202ENST00000409817 PRB3Q04118 309 aaPredicted RBP5.95□□□□□ -1.46
CXCR4-202ENST00000409817 KLRD1Q13241 179 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 LHFPL4Q7Z7J7 247 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 LINC01551Q86U37 167 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 Q8N6K4 173 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 OR4X1Q8NH49 305 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 Q8WTZ3 238 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 PERPQ96FX8 193 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 IMMP2LQ96T52 175 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 CCL19Q99731 98 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 PIMREGQ9BSJ6 248 aa5.95□□□□□ -1.46
CXCR4-202ENST00000409817 YTHDF2Q9Y5A9 579 aaKnown RBP5.95□□□□□ -1.46
CXCR4-202ENST00000409817 NPIPB5A8MRT5 1133 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 IGHV4-39P01824 125 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 GATA2P23769 480 aaPredicted RBP5.94□□□□□ -1.46
CXCR4-202ENST00000409817 SRP14P37108 136 aaKnown RBP5.94□□□□□ -1.46
CXCR4-202ENST00000409817 RPS10P46783 165 aaKnown RBP5.94□□□□□ -1.46
CXCR4-202ENST00000409817 MFAP2P55001 183 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 LCN2P80188 198 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 HES1Q14469 280 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 FXYD3Q14802 87 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 C19orf54Q5BKX5 351 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 S100A7AQ86SG5 101 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 NUDT10Q8NFP7 164 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 OR51G1Q8NGK1 321 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 NUDT11Q96G61 164 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 FAM210BQ96KR6 192 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 FAM167A-AS1Q96KT0 104 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 PYGO2Q9BRQ0 406 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 TRAV30A0A087WSZ9 112 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 I3L2K1 104 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 FCN1O00602 326 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 ZNF90Q03938 601 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 KCNIP4Q6PIL6 250 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 C16orf82Q7Z2V1 217 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 OR5AU1Q8NGC0 362 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 ZNF503Q96F45 646 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 ZNF48Q96MX3 618 aaPredicted RBP5.94□□□□□ -1.46
CXCR4-202ENST00000409817 TBX15Q96SF7 602 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 SLC25A2Q9BXI2 301 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 ZNF355PQ9NSJ1 428 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 URGCP-MRPS24S4R325 110 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 NAV3Q8IVL0 2385 aa5.94□□□□□ -1.46
CXCR4-202ENST00000409817 SCO2A0A1W2PP80 73 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 HYPMO75409 117 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 SCGB2A1O75556 95 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 PFN1P07737 140 aaKnown RBP5.93□□□□□ -1.46
CXCR4-202ENST00000409817 IGLC1P0CG04 106 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 TMEM11P17152 192 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 GALR1P47211 349 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 DSCR9P59020 149 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 UBE2L3P68036 154 aaKnown RBP5.93□□□□□ -1.46
CXCR4-202ENST00000409817 ZNF343Q6P1L6 599 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 CLEC2AQ6UVW9 174 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 LINC00305Q7Z4B0 112 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 TTC9CQ8N5M4 171 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 ARPC1AQ92747 370 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 PAXXQ9BUH6 204 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 OR51M1Q9H341 326 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 SAV1Q9H4B6 383 aaPredicted RBP5.93□□□□□ -1.46
CXCR4-202ENST00000409817 THYN1Q9P016 225 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 MRPL36Q9P0J6 103 aaKnown RBP5.93□□□□□ -1.46
CXCR4-202ENST00000409817 PLXNB1O43157 2135 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 NBEAQ8NFP9 2946 aa5.93□□□□□ -1.46
CXCR4-202ENST00000409817 TRAV9-1A0A075B6T8 112 aa5.92□□□□□ -1.46
CXCR4-202ENST00000409817 TGIF2-C20orf24A0A0A6YYL0 155 aa5.92□□□□□ -1.46
CXCR4-202ENST00000409817 MDFIC2A0A1B0GVS7 189 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms