RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 PVRIGQ6DKI7 326 aa12.21□□□□□ -0.45
SHANK2-204ENST00000409530 SLC25A22Q9H936 323 aa12.21□□□□□ -0.45
SHANK2-204ENST00000409530 C21orf62Q9NYP8 219 aa12.21□□□□□ -0.45
SHANK2-204ENST00000409530 NIPBLQ6KC79 2804 aaeCLIP12.2□□□□□ -0.46
SHANK2-204ENST00000409530 IGKV1D-37A0A075B6S9 117 aa12.2□□□□□ -0.46
SHANK2-204ENST00000409530 IGHV3OR16-8A0A075B7F1 116 aa12.2□□□□□ -0.46
SHANK2-204ENST00000409530 NMBP08949 121 aa12.2□□□□□ -0.46
SHANK2-204ENST00000409530 MDKP21741 143 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-204ENST00000409530 PPIFP30405 207 aaKnown RBP12.2□□□□□ -0.46
SHANK2-204ENST00000409530 Q6ZSV7 163 aa12.2□□□□□ -0.46
SHANK2-204ENST00000409530 RNF141Q8WVD5 230 aa12.2□□□□□ -0.46
SHANK2-204ENST00000409530 TMEM68Q96MH6 324 aa12.2□□□□□ -0.46
SHANK2-204ENST00000409530 SETD2Q9BYW2 2564 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-204ENST00000409530 SULT1A2P50226 295 aa12.2□□□□□ -0.46
SHANK2-204ENST00000409530 CRIP2P52943 208 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-204ENST00000409530 FAM122CQ6P4D5 195 aa12.2□□□□□ -0.46
SHANK2-204ENST00000409530 CLEC19AQ6UXS0 136 aa12.2□□□□□ -0.46
SHANK2-204ENST00000409530 PSMG3Q9BT73 122 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-204ENST00000409530 PARD6GQ9BYG4 376 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-204ENST00000409530 MAST4O15021 2626 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 PSMB11A5LHX3 300 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 MPDU1O75352 247 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 FAM157CP0CG43 387 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 HIST1H1BP16401 226 aaKnown RBP12.19□□□□□ -0.46
SHANK2-204ENST00000409530 KHDC1LQ5JSQ8 128 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 CYP2G1PQ6ZSU1 146 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 SSX7Q7RTT5 188 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 NECAP1Q8NC96 275 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 PBDC1Q9BVG4 233 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 HRH4Q9H3N8 390 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 RPRMQ9NS64 109 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 TSPAN15O95858 294 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 LINC00869P0C866 280 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 MFAP4P55083 255 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 ATP5G2Q06055 141 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 CENPVQ7Z7K6 275 aaPredicted RBP12.19□□□□□ -0.46
SHANK2-204ENST00000409530 C11orf44Q8N8P7 122 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 TMEM116Q8NCL8 245 aa12.19□□□□□ -0.46
SHANK2-204ENST00000409530 TRBV9A0A0B4J1U6 114 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 TCRBV4S1A1TA0A5B7 111 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 PPP5D1E7EU14 171 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 FNDC10F2Z333 226 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 CRLF1O75462 422 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 CLN5O75503 358 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 RNASE1P07998 156 aaKnown RBP12.18□□□□□ -0.46
SHANK2-204ENST00000409530 IGLC1P0CG04 106 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 FGF8P55075 233 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-204ENST00000409530 PXDC1Q5TGL8 231 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 OR10G4Q8NGN3 311 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 OR4X1Q8NH49 305 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 CCDC140Q96MF4 163 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 SERTAD4Q9NUC0 356 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 SLC39A9Q9NUM3 307 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 TIMM9Q9Y5J7 89 aa12.18□□□□□ -0.46
SHANK2-204ENST00000409530 F8W735 103 aaPredicted RBP12.17□□□□□ -0.46
SHANK2-204ENST00000409530 HAX1O00165 279 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 YIF1AO95070 293 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 ORM2P19652 201 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 NPBWR1P48145 328 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 CFHR3Q02985 330 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 TMEM41BQ5BJD5 291 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 LCN15Q6UWW0 184 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 SLC45A2Q9UMX9 530 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 TCF21O43680 179 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 RPLP1P05386 114 aaKnown RBP12.17□□□□□ -0.46
SHANK2-204ENST00000409530 ZP3P21754 424 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 LYZP61626 148 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 SLC35B1P78383 322 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 THAP8Q8NA92 274 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 OR1B1Q8NGR6 318 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 EEF1AKMT3Q96AZ1 226 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 UHRF2Q96PU4 802 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 CHRDL1Q9BU40 450 aa12.17□□□□□ -0.46
SHANK2-204ENST00000409530 TRBV12-3P01733 135 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 CLEC3BP05452 202 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 OR5G3P0C626 314 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 RAB9AP51151 201 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 SPATA31B1PQ5VZV4 182 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 ZNF502Q8TBZ5 544 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 IGKV1-17P01599 117 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 IGLV1-40P01703 118 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 PSG1P11464 419 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 SERF2P84101 59 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 ZNF726P1Q15940 193 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 ACOT6Q3I5F7 207 aaPredicted RBP12.16□□□□□ -0.46
SHANK2-204ENST00000409530 RPP25LQ8N5L8 163 aaKnown RBP12.16□□□□□ -0.46
SHANK2-204ENST00000409530 SFT2D1Q8WV19 159 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 RCC1LQ96I51 464 aaKnown RBP12.16□□□□□ -0.46
SHANK2-204ENST00000409530 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
SHANK2-204ENST00000409530 FAM223BA6NKX1 122 aa12.15□□□□□ -0.46
SHANK2-204ENST00000409530 UMAD1C9J7I0 102 aa12.15□□□□□ -0.46
SHANK2-204ENST00000409530 KRBOX1C9JBD0 128 aa12.15□□□□□ -0.46
SHANK2-204ENST00000409530 CLDN34H7C241 214 aa12.15□□□□□ -0.46
SHANK2-204ENST00000409530 RPL29P47914 159 aaKnown RBP12.15□□□□□ -0.46
SHANK2-204ENST00000409530 PRR20EP86478 221 aa12.15□□□□□ -0.46
SHANK2-204ENST00000409530 PRR20CP86479 221 aa12.15□□□□□ -0.46
SHANK2-204ENST00000409530 PRR20DP86480 221 aa12.15□□□□□ -0.46
SHANK2-204ENST00000409530 PRR20BP86481 221 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms