RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 POM121L2Q96KW2 1035 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 HDHD3Q9BSH5 251 aaPredicted RBP4.46□□□□□ -1.7
CLK1-202ENST00000409403 ZNF331Q9NQX6 463 aaPredicted RBP4.46□□□□□ -1.7
CLK1-202ENST00000409403 SLC7A10Q9NS82 523 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 MRPL16Q9NX20 251 aaKnown RBP4.46□□□□□ -1.7
CLK1-202ENST00000409403 ZNF391Q9UJN7 358 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 LHFPL6Q9Y693 200 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 CPAMD8Q8IZJ3 1885 aa4.46□□□□□ -1.7
CLK1-202ENST00000409403 TRAV26-1A0A087WT03 109 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 TRGV10A0A0A0MS01 117 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 IGHV4-28A0A0C4DH34 117 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 A0A1W2PNU3 283 aaPredicted RBP4.45□□□□□ -1.7
CLK1-202ENST00000409403 FAM231BA6NCW3 169 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 G3V3Y1 287 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 H3BP45 60 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 SLC17A3O00476 420 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 TNFRSF13BO14836 293 aaPredicted RBP4.45□□□□□ -1.7
CLK1-202ENST00000409403 RAB29O14966 203 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 HBZP02008 142 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 OR9G9P0C7N8 305 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 ZNF17P17021 662 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 POU3F1Q03052 451 aaPredicted RBP4.45□□□□□ -1.7
CLK1-202ENST00000409403 SMAGPQ0VAQ4 97 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 MYBPHQ13203 477 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 LTC4SQ16873 150 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 TMEM97Q5BJF2 176 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 TMEM14EPQ6UXP3 125 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 ATOH7Q8N100 152 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 GAPTQ8N292 157 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 TMEM45BQ96B21 275 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 CHCHD1Q96BP2 118 aaKnown RBP4.45□□□□□ -1.7
CLK1-202ENST00000409403 GRAMD2BQ96HH9 432 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 NRTNQ99748 197 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 LINC00470Q9BZP3 86 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 PKIBQ9C010 78 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 HES4Q9HCC6 221 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 NPVFQ9HCQ7 196 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 SCRT2Q9NQ03 307 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 PRTFDC1Q9NRG1 225 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 HSPB8Q9UJY1 196 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 MXRA5Q9NR99 2828 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 A0A0G2JLM5 398 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 A0A1W2PR80 420 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 IZUMO1RA6ND01 250 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 LRRC30A6NM36 301 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 F2Z2F3 143 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 H0YGG7 62 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 KLRC4-KLRK1H3BQV0 150 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 BMPR1BO00238 502 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 SIVA1O15304 175 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 NAPSAO96009 420 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 IGKV1D-33P01593 117 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 IGKV1-33P01594 117 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 CT45A6P0DMU7 189 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 CT45A5P0DMU8 189 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 CT45A7P0DMV0 189 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 IAPPP10997 89 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 AREGP15514 252 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 NPPCP23582 126 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 PTGDSP41222 190 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 CA7P43166 264 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 CLDN17P56750 224 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 MLF1P58340 268 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 RPL24P83731 157 aaKnown RBP4.45□□□□□ -1.7
CLK1-202ENST00000409403 RUNX3Q13761 415 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 EFNB3Q15768 340 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 VWC2Q2TAL6 325 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 HNRNPA1L2Q32P51 320 aaKnown RBP4.45□□□□□ -1.7
CLK1-202ENST00000409403 TIGITQ495A1 244 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 CT45A1Q5HYN5 189 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 SPANXN5Q5MJ07 72 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 OTPQ5XKR4 325 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 PLCXD3Q63HM9 321 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 FOXI2Q6ZQN5 318 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 ZNF818PQ6ZRF7 136 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 ATP5L2Q7Z4Y8 100 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 C1QL2Q7Z5L3 287 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 OOSP2Q86WS3 158 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 TMEM251Q8N6I4 163 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 OR9G4Q8NGQ1 327 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 OR4A16Q8NH70 328 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 CT45A3Q8NHU0 189 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 LMX1AQ8TE12 382 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 ST8SIA1Q92185 356 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 RDH5Q92781 318 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 BORCS8Q96FH0 119 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 RCHY1Q96PM5 261 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 MAP1LC3CQ9BXW4 147 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 NPCDR1Q9BY65 106 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 RTN4RQ9BZR6 473 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 GTSF1LQ9H1H1 148 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 ZNF442Q9H7R0 627 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 GEMIN7Q9H840 131 aaKnown RBP4.45□□□□□ -1.7
CLK1-202ENST00000409403 FAM60AQ9NP50 221 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 SIGLEC8Q9NYZ4 499 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 CACNG5Q9UF02 275 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 PIGLQ9Y2B2 252 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 ZNF257Q9Y2Q1 563 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 SPCS1Q9Y6A9 102 aa4.45□□□□□ -1.7
CLK1-202ENST00000409403 PKDREJQ9NTG1 2253 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms