RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 SLC35E1Q96K37 410 aa15.39■□□□□ 0.05
PTCD3-202ENST00000409326 C20orf24Q9BUV8 137 aa15.39■□□□□ 0.05
PTCD3-202ENST00000409326 ZNF256Q9Y2P7 627 aaPredicted RBP15.39■□□□□ 0.05
PTCD3-202ENST00000409326 LSM5Q9Y4Y9 91 aaKnown RBP15.39■□□□□ 0.05
PTCD3-202ENST00000409326 PRKDCP78527 4128 aaKnown RBP15.39■□□□□ 0.05
PTCD3-202ENST00000409326 K7EMT4 169 aa15.38■□□□□ 0.05
PTCD3-202ENST00000409326 YIF1AO95070 293 aa15.38■□□□□ 0.05
PTCD3-202ENST00000409326 C8orf88P0DMB2 117 aa15.38■□□□□ 0.05
PTCD3-202ENST00000409326 OR10J1P30954 320 aa15.38■□□□□ 0.05
PTCD3-202ENST00000409326 GAMTQ14353 236 aa15.38■□□□□ 0.05
PTCD3-202ENST00000409326 TIGITQ495A1 244 aa15.38■□□□□ 0.05
PTCD3-202ENST00000409326 TMEM14EPQ6UXP3 125 aa15.38■□□□□ 0.05
PTCD3-202ENST00000409326 OR2K2Q8NGT1 345 aa15.38■□□□□ 0.05
PTCD3-202ENST00000409326 DYNLRB2Q8TF09 96 aa15.38■□□□□ 0.05
PTCD3-202ENST00000409326 TECRQ9NZ01 308 aaKnown RBP15.38■□□□□ 0.05
PTCD3-202ENST00000409326 MRPL27Q9P0M9 148 aaKnown RBP15.38■□□□□ 0.05
PTCD3-202ENST00000409326 ALG5Q9Y673 324 aa15.38■□□□□ 0.05
PTCD3-202ENST00000409326 IGHV3OR16-8A0A075B7F1 116 aa15.37■□□□□ 0.05
PTCD3-202ENST00000409326 SIX6O95475 246 aa15.37■□□□□ 0.05
PTCD3-202ENST00000409326 RAB32Q13637 225 aa15.37■□□□□ 0.05
PTCD3-202ENST00000409326 TOMM20LQ6UXN7 152 aa15.37■□□□□ 0.05
PTCD3-202ENST00000409326 NMES1Q9C002 83 aa15.37■□□□□ 0.05
PTCD3-202ENST00000409326 C11orf1Q9H5F2 150 aa15.37■□□□□ 0.05
PTCD3-202ENST00000409326 ZFAND3Q9H8U3 227 aa15.37■□□□□ 0.05
PTCD3-202ENST00000409326 PUS1Q9Y606 427 aaKnown RBP eCLIP15.37■□□□□ 0.05
PTCD3-202ENST00000409326 WI2-2373I1.2A0A1W2PRP0 233 aa15.36■□□□□ 0.05
PTCD3-202ENST00000409326 PMS2P5A8MQ11 134 aa15.36■□□□□ 0.05
PTCD3-202ENST00000409326 L7N2F9 121 aa15.36■□□□□ 0.05
PTCD3-202ENST00000409326 S100A10P60903 97 aa15.36■□□□□ 0.05
PTCD3-202ENST00000409326 YPEL3P61236 119 aaPredicted RBP15.36■□□□□ 0.05
PTCD3-202ENST00000409326 VAMP2P63027 116 aa15.36■□□□□ 0.05
PTCD3-202ENST00000409326 DEFB114Q30KQ6 69 aa15.36■□□□□ 0.05
PTCD3-202ENST00000409326 LCN12Q6JVE5 192 aa15.36■□□□□ 0.05
PTCD3-202ENST00000409326 PRR25Q96S07 402 aa15.36■□□□□ 0.05
PTCD3-202ENST00000409326 ZNF207O43670 478 aaKnown RBP15.35■□□□□ 0.05
PTCD3-202ENST00000409326 METTL15P1P0C7V9 234 aa15.35■□□□□ 0.05
PTCD3-202ENST00000409326 GP9P14770 177 aa15.35■□□□□ 0.05
PTCD3-202ENST00000409326 PVALBP20472 110 aaPredicted RBP15.35■□□□□ 0.05
PTCD3-202ENST00000409326 H2BFSP57053 126 aa15.35■□□□□ 0.05
PTCD3-202ENST00000409326 CYCSP99999 105 aaKnown RBP15.35■□□□□ 0.05
PTCD3-202ENST00000409326 CD300EQ496F6 205 aaPredicted RBP15.35■□□□□ 0.05
PTCD3-202ENST00000409326 GINS3Q9BRX5 216 aa15.35■□□□□ 0.05
PTCD3-202ENST00000409326 MGAT4CQ9UBM8 478 aa15.35■□□□□ 0.05
PTCD3-202ENST00000409326 MLXQ9UH92 298 aa15.35■□□□□ 0.05
PTCD3-202ENST00000409326 K7EIL1 84 aa15.34■□□□□ 0.05
PTCD3-202ENST00000409326 OXA1LQ15070 435 aa15.34■□□□□ 0.05
PTCD3-202ENST00000409326 OR8G2PQ6IF36 304 aa15.34■□□□□ 0.05
PTCD3-202ENST00000409326 BTNL8Q6UX41 500 aa15.34■□□□□ 0.05
PTCD3-202ENST00000409326 ACOT7LQ6ZUV0 252 aa15.34■□□□□ 0.05
PTCD3-202ENST00000409326 IGKV1D-37A0A075B6S9 117 aa15.33■□□□□ 0.04
PTCD3-202ENST00000409326 IZUMO1RA6ND01 250 aa15.33■□□□□ 0.04
PTCD3-202ENST00000409326 ZFP92A6NM28 416 aa15.33■□□□□ 0.04
PTCD3-202ENST00000409326 CCNKO75909 580 aa15.33■□□□□ 0.04
PTCD3-202ENST00000409326 SCAF4O95104 1147 aaKnown RBP15.33■□□□□ 0.04
PTCD3-202ENST00000409326 TOMM40O96008 361 aa15.33■□□□□ 0.04
PTCD3-202ENST00000409326 THAP8Q8NA92 274 aa15.33■□□□□ 0.04
PTCD3-202ENST00000409326 TRAV14DV4A0A0A6YYC5 116 aa15.32■□□□□ 0.04
PTCD3-202ENST00000409326 IGHV7-4-1A0A0J9YVY3 117 aa15.32■□□□□ 0.04
PTCD3-202ENST00000409326 DEDDO75618 318 aa15.32■□□□□ 0.04
PTCD3-202ENST00000409326 BCAP31P51572 246 aa15.32■□□□□ 0.04
PTCD3-202ENST00000409326 OR10P1Q8NGE3 313 aa15.32■□□□□ 0.04
PTCD3-202ENST00000409326 MRAPQ8TCY5 172 aa15.32■□□□□ 0.04
PTCD3-202ENST00000409326 Q8WTZ3 238 aa15.32■□□□□ 0.04
PTCD3-202ENST00000409326 LYRM2Q9NU23 88 aaPredicted RBP15.32■□□□□ 0.04
PTCD3-202ENST00000409326 SMPXQ9UHP9 88 aa15.32■□□□□ 0.04
PTCD3-202ENST00000409326 IGKV1OR2-108A0A075B7D4 117 aa15.31■□□□□ 0.04
PTCD3-202ENST00000409326 RD3LP0DJH9 198 aa15.31■□□□□ 0.04
PTCD3-202ENST00000409326 CAV2P51636 162 aa15.31■□□□□ 0.04
PTCD3-202ENST00000409326 DLK1P80370 383 aa15.31■□□□□ 0.04
PTCD3-202ENST00000409326 TMEM61Q8N0U2 210 aa15.31■□□□□ 0.04
PTCD3-202ENST00000409326 TRGV9Q99603 122 aa15.31■□□□□ 0.04
PTCD3-202ENST00000409326 FNDC10F2Z333 226 aa15.3■□□□□ 0.04
PTCD3-202ENST00000409326 CHEK1O14757 476 aa15.3■□□□□ 0.04
PTCD3-202ENST00000409326 PSG1P11464 419 aa15.3■□□□□ 0.04
PTCD3-202ENST00000409326 AKR1C1Q04828 323 aa15.3■□□□□ 0.04
PTCD3-202ENST00000409326 LRRC37A5PQ49AS3 106 aa15.3■□□□□ 0.04
PTCD3-202ENST00000409326 TMEM144Q7Z5S9 345 aa15.3■□□□□ 0.04
PTCD3-202ENST00000409326 PPP1R1CQ8WVI7 109 aa15.3■□□□□ 0.04
PTCD3-202ENST00000409326 WDR89Q96FK6 387 aaPredicted RBP15.3■□□□□ 0.04
PTCD3-202ENST00000409326 RHPN1-AS1Q9BWJ2 59 aa15.3■□□□□ 0.04
PTCD3-202ENST00000409326 SELENOKQ9Y6D0 94 aa15.3■□□□□ 0.04
PTCD3-202ENST00000409326 TRAV25A0A0B4J276 109 aa15.29■□□□□ 0.04
PTCD3-202ENST00000409326 FAM24AA6NFZ4 105 aa15.29■□□□□ 0.04
PTCD3-202ENST00000409326 RLN2P04090 185 aa15.29■□□□□ 0.04
PTCD3-202ENST00000409326 IL4P05112 153 aa15.29■□□□□ 0.04
PTCD3-202ENST00000409326 FABP1P07148 127 aa15.29■□□□□ 0.04
PTCD3-202ENST00000409326 RRAS2P62070 204 aaPredicted RBP15.29■□□□□ 0.04
PTCD3-202ENST00000409326 ZNF90Q03938 601 aa15.29■□□□□ 0.04
PTCD3-202ENST00000409326 ARL16Q0P5N6 197 aa15.29■□□□□ 0.04
PTCD3-202ENST00000409326 METTL26Q96S19 204 aa15.29■□□□□ 0.04
PTCD3-202ENST00000409326 MED28Q9H204 178 aa15.29■□□□□ 0.04
PTCD3-202ENST00000409326 IGHV3-49A0A0A0MS15 119 aa15.28■□□□□ 0.04
PTCD3-202ENST00000409326 SMCO3A2RU48 225 aa15.28■□□□□ 0.04
PTCD3-202ENST00000409326 ZNF785A8K8V0 405 aa15.28■□□□□ 0.04
PTCD3-202ENST00000409326 CXCL3P19876 107 aa15.28■□□□□ 0.04
PTCD3-202ENST00000409326 NPPCP23582 126 aa15.28■□□□□ 0.04
PTCD3-202ENST00000409326 CRYBB3P26998 211 aa15.28■□□□□ 0.04
PTCD3-202ENST00000409326 BMI1P35226 326 aa15.28■□□□□ 0.04
PTCD3-202ENST00000409326 TMEM252Q8N6L7 170 aa15.28■□□□□ 0.04
PTCD3-202ENST00000409326 OR51G1Q8NGK1 321 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms