RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 SCGB2A1O75556 95 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 DFFBO76075 338 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 IGHV3-23P01764 117 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 CTSGP08311 255 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 IGLC1P0CG04 106 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 AKR1C1Q04828 323 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 TREML4Q6UXN2 200 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 C18orf65Q6ZTR6 163 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 C3orf56Q8N813 242 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 FBXL17Q9UF56 701 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 IGKV1OR2-108A0A075B7D4 117 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 OR2T8A6NH00 312 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 AP2S1P53680 142 aaPredicted RBP15.78■□□□□ 0.12
VSX1-203ENST00000409285 SHISA2Q6UWI4 295 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 C9orf62Q8N4C0 152 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 UBAC2Q8NBM4 344 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 WDR83OSQ9Y284 106 aa15.78■□□□□ 0.12
VSX1-203ENST00000409285 IGKV1D-37A0A075B6S9 117 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 NUDT19A8MXV4 375 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 BMPR1BO00238 502 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 TAAR5O14804 337 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 MPDU1O75352 247 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 TRBV12-3P01733 135 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 HSPB1P04792 205 aaKnown RBP15.77■□□□□ 0.11
VSX1-203ENST00000409285 CXCL2P19875 107 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 OR10J1P30954 320 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 ADMP35318 185 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 ARL3P36405 182 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 FHL3Q13643 280 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 CLINT1Q14677 625 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 TEPPQ6URK8 271 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 C8orf86Q6ZUL3 223 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 OR5B12Q96R08 314 aa15.77■□□□□ 0.11
VSX1-203ENST00000409285 PARD6GQ9BYG4 376 aaPredicted RBP15.77■□□□□ 0.11
VSX1-203ENST00000409285 SMCO3A2RU48 225 aa15.76■□□□□ 0.11
VSX1-203ENST00000409285 NUPL2O15504 423 aaKnown RBP15.76■□□□□ 0.11
VSX1-203ENST00000409285 IGKV1-17P01599 117 aa15.76■□□□□ 0.11
VSX1-203ENST00000409285 ZNF266Q14584 549 aa15.76■□□□□ 0.11
VSX1-203ENST00000409285 HIST2H2BDQ6DRA6 164 aa15.76■□□□□ 0.11
VSX1-203ENST00000409285 TRGV9Q99603 122 aa15.76■□□□□ 0.11
VSX1-203ENST00000409285 UBE2L5PA0A1B0GUS4 154 aa15.75■□□□□ 0.11
VSX1-203ENST00000409285 PPP5D1E7EU14 171 aa15.75■□□□□ 0.11
VSX1-203ENST00000409285 GGCTO75223 188 aaKnown RBP15.75■□□□□ 0.11
VSX1-203ENST00000409285 YPEL3P61236 119 aaPredicted RBP15.75■□□□□ 0.11
VSX1-203ENST00000409285 LAMTOR1Q6IAA8 161 aa15.75■□□□□ 0.11
VSX1-203ENST00000409285 CHRDL1Q9BU40 450 aa15.75■□□□□ 0.11
VSX1-203ENST00000409285 SMIM3Q9BZL3 60 aa15.75■□□□□ 0.11
VSX1-203ENST00000409285 IGHV4OR15-8A0A075B7B6 117 aa15.74■□□□□ 0.11
VSX1-203ENST00000409285 A0A087WW49 117 aa15.74■□□□□ 0.11
VSX1-203ENST00000409285 A0A1W2PRX2 142 aa15.74■□□□□ 0.11
VSX1-203ENST00000409285 ANKRD34BA5PLL1 514 aa15.74■□□□□ 0.11
VSX1-203ENST00000409285 ZFP92A6NM28 416 aa15.74■□□□□ 0.11
VSX1-203ENST00000409285 ZP3P21754 424 aa15.74■□□□□ 0.11
VSX1-203ENST00000409285 RELQ04864 619 aaPredicted RBP15.74■□□□□ 0.11
VSX1-203ENST00000409285 ZNF616Q08AN1 781 aa15.74■□□□□ 0.11
VSX1-203ENST00000409285 DEFB136Q30KP8 78 aa15.74■□□□□ 0.11
VSX1-203ENST00000409285 LGALSLQ3ZCW2 172 aaPredicted RBP15.74■□□□□ 0.11
VSX1-203ENST00000409285 OR11H1Q8NG94 326 aa15.74■□□□□ 0.11
VSX1-203ENST00000409285 WFDC1Q9HC57 220 aa15.74■□□□□ 0.11
VSX1-203ENST00000409285 TRRAPQ9Y4A5 3859 aa15.74■□□□□ 0.11
VSX1-203ENST00000409285 LINC01619G3V211 115 aa15.73■□□□□ 0.11
VSX1-203ENST00000409285 FABP1P07148 127 aa15.73■□□□□ 0.11
VSX1-203ENST00000409285 NSUN5P1Q3KNT7 163 aa15.73■□□□□ 0.11
VSX1-203ENST00000409285 OR1N2Q8NGR9 330 aa15.73■□□□□ 0.11
VSX1-203ENST00000409285 ZNF414Q96IQ9 312 aa15.73■□□□□ 0.11
VSX1-203ENST00000409285 RAX2Q96IS3 184 aa15.73■□□□□ 0.11
VSX1-203ENST00000409285 WDR61Q9GZS3 305 aaKnown RBP15.73■□□□□ 0.11
VSX1-203ENST00000409285 BOLA1Q9Y3E2 137 aa15.73■□□□□ 0.11
VSX1-203ENST00000409285 BCL2L11O43521 198 aa15.72■□□□□ 0.11
VSX1-203ENST00000409285 TMUB2Q71RG4 321 aa15.72■□□□□ 0.11
VSX1-203ENST00000409285 GPHB5Q86YW7 130 aa15.72■□□□□ 0.11
VSX1-203ENST00000409285 MGST2Q99735 147 aa15.72■□□□□ 0.11
VSX1-203ENST00000409285 ARPC5LQ9BPX5 153 aa15.72■□□□□ 0.11
VSX1-203ENST00000409285 ARL6Q9H0F7 186 aa15.72■□□□□ 0.11
VSX1-203ENST00000409285 CCL24O00175 119 aa15.71■□□□□ 0.11
VSX1-203ENST00000409285 TOMM40O96008 361 aa15.71■□□□□ 0.11
VSX1-203ENST00000409285 IFNA5P01569 189 aa15.71■□□□□ 0.11
VSX1-203ENST00000409285 SELENOTP62341 195 aa15.71■□□□□ 0.11
VSX1-203ENST00000409285 RAB31Q13636 194 aa15.71■□□□□ 0.11
VSX1-203ENST00000409285 TIGITQ495A1 244 aa15.71■□□□□ 0.11
VSX1-203ENST00000409285 BTNL8Q6UX41 500 aa15.71■□□□□ 0.11
VSX1-203ENST00000409285 ZNF600Q6ZNG1 722 aa15.71■□□□□ 0.11
VSX1-203ENST00000409285 OR4F17Q8NGA8 305 aa15.71■□□□□ 0.11
VSX1-203ENST00000409285 OR4F4Q96R69 305 aa15.71■□□□□ 0.11
VSX1-203ENST00000409285 NPCDR1Q9BY65 106 aa15.71■□□□□ 0.11
VSX1-203ENST00000409285 KANTRA0A1W2PQU2 76 aa15.71■□□□□ 0.1
VSX1-203ENST00000409285 NDUFA4O00483 81 aa15.71■□□□□ 0.1
VSX1-203ENST00000409285 AGPAT2O15120 278 aa15.71■□□□□ 0.1
VSX1-203ENST00000409285 JTBO76095 146 aa15.71■□□□□ 0.1
VSX1-203ENST00000409285 FGF7P21781 194 aa15.71■□□□□ 0.1
VSX1-203ENST00000409285 HOXD3P31249 432 aaPredicted RBP15.71■□□□□ 0.1
VSX1-203ENST00000409285 MYCNOSP40205 109 aa15.71■□□□□ 0.1
VSX1-203ENST00000409285 DPF1Q92782 380 aa15.71■□□□□ 0.1
VSX1-203ENST00000409285 CYTL1Q9NRR1 136 aa15.71■□□□□ 0.1
VSX1-203ENST00000409285 OR2C1O95371 312 aa15.7■□□□□ 0.1
VSX1-203ENST00000409285 CFDP00746 253 aaPredicted RBP15.7■□□□□ 0.1
VSX1-203ENST00000409285 CAMLGP49069 296 aa15.7■□□□□ 0.1
VSX1-203ENST00000409285 ZNF90Q03938 601 aa15.7■□□□□ 0.1
VSX1-203ENST00000409285 OPCMLQ14982 345 aa15.7■□□□□ 0.1
VSX1-203ENST00000409285 RPEL1Q2QD12 228 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms