RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 JPT2Q9H910 190 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 PILRAQ9UKJ1 303 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 C5orf67F2Z3F1 127 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 INAFM2P0DMQ5 153 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 SPINK2P20155 84 aa10.23□□□□□ -0.77
SHANK2-203ENST00000409161 VWC2LB2RUY7 222 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 SRSF7Q16629 238 aaKnown RBP eCLIP10.22□□□□□ -0.774e-9■■■■■ 29.7
SHANK2-203ENST00000409161 C1orf194Q5T5A4 169 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 FGF11Q92914 225 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 RTBDNQ9BSG5 229 aaPredicted RBP10.22□□□□□ -0.77
SHANK2-203ENST00000409161 EPDR1Q9UM22 224 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 ITGB1BP1O14713 200 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 CHAC1Q9BUX1 264 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 ZNF525Q8N782 197 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 APOBEC3AP31941 199 aaPredicted RBP10.22□□□□□ -0.77
SHANK2-203ENST00000409161 ZP1P60852 638 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 FAM90A2PQ658T7 463 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 VGLL1Q99990 258 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 GFRA3O60609 400 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 CMC4P56277 68 aaPredicted RBP10.22□□□□□ -0.77
SHANK2-203ENST00000409161 NEU4Q8WWR8 484 aaPredicted RBP10.22□□□□□ -0.77
SHANK2-203ENST00000409161 CENPVL1A0A0U1RR11 272 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 PIN1P1O15428 100 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 TIMP3P35625 211 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 RPL39P5Q59GN2 51 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 FAM89BQ8N5H3 189 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 IGKV1D-42A0A075B6H8 117 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 A0A1B0GTI1 187 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 HIST1H4AP62805 103 aaKnown RBP10.22□□□□□ -0.77
SHANK2-203ENST00000409161 UBE2V1Q13404 147 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 PPP1R27Q86WC6 154 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 KLF12Q9Y4X4 402 aa10.22□□□□□ -0.77
SHANK2-203ENST00000409161 MESP2Q0VG99 397 aa10.21□□□□□ -0.77
SHANK2-203ENST00000409161 Q5BKY6 102 aa10.21□□□□□ -0.77
SHANK2-203ENST00000409161 ASCL4Q6XD76 172 aa10.21□□□□□ -0.77
SHANK2-203ENST00000409161 YPEL1O60688 119 aa10.21□□□□□ -0.77
SHANK2-203ENST00000409161 HIST3H2BBQ8N257 126 aa10.21□□□□□ -0.77
SHANK2-203ENST00000409161 YPEL2Q96QA6 119 aa10.21□□□□□ -0.77
SHANK2-203ENST00000409161 LINC01590Q5TEZ4 76 aa10.21□□□□□ -0.77
SHANK2-203ENST00000409161 C2orf82Q6UX34 121 aa10.21□□□□□ -0.77
SHANK2-203ENST00000409161 ITLN2Q8WWU7 325 aaPredicted RBP10.21□□□□□ -0.78
SHANK2-203ENST00000409161 F8WEM9 126 aa10.21□□□□□ -0.78
SHANK2-203ENST00000409161 H3BTX0 84 aa10.21□□□□□ -0.78
SHANK2-203ENST00000409161 KLF4O43474 513 aa10.21□□□□□ -0.78
SHANK2-203ENST00000409161 KLF17Q5JT82 389 aaPredicted RBP10.21□□□□□ -0.78
SHANK2-203ENST00000409161 FAM219BQ5XKK7 198 aa10.21□□□□□ -0.78
SHANK2-203ENST00000409161 CTHRC1Q96CG8 243 aa10.21□□□□□ -0.78
SHANK2-203ENST00000409161 COX11Q9Y6N1 276 aa10.21□□□□□ -0.78
SHANK2-203ENST00000409161 UPK2O00526 184 aa10.21□□□□□ -0.78
SHANK2-203ENST00000409161 FHL5Q5TD97 284 aa10.21□□□□□ -0.78
SHANK2-203ENST00000409161 COL11A2P13942 1736 aaPredicted RBP10.21□□□□□ -0.78
SHANK2-203ENST00000409161 TDGF1P3P51864 188 aa10.21□□□□□ -0.78
SHANK2-203ENST00000409161 AMELYQ99218 206 aa10.21□□□□□ -0.78
SHANK2-203ENST00000409161 RPRMLQ8N4K4 120 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 WBP1LQ9NX94 342 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 FBLN5Q9UBX5 448 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 A0A0G2JMM0 328 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 A0A1W2PPB8 328 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 KIR3DP1A8MWS1 328 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 ZNHIT1O43257 154 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 RNF125Q96EQ8 232 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 C1QTNF5Q9BXJ0 243 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 TRBV20-1A0A075B6N2 111 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 LINC00271P0C7V0 271 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 ATP5G3P48201 142 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 TMEM52Q8NDY8 209 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 AGMATQ9BSE5 352 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 SLC25A39Q9BZJ4 359 aaPredicted RBP10.2□□□□□ -0.78
SHANK2-203ENST00000409161 MRPL27Q9P0M9 148 aaKnown RBP10.2□□□□□ -0.78
SHANK2-203ENST00000409161 GZMBP10144 247 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 ACTL10Q5JWF8 245 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 GAGE12BA1L429 117 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 IGKV1D-33P01593 117 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 IGKV1-33P01594 117 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 TEX38Q6PEX7 206 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 GPHA2Q96T91 129 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 OVOL1O14753 267 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 NBR2O15453 112 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 LURAP1LQ8IV03 231 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 LY96Q9Y6Y9 160 aa10.2□□□□□ -0.78
SHANK2-203ENST00000409161 DLEU1O43261 78 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 IGKV3-20P01619 116 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 SMRP1Q8NCR6 262 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 MALRD1Q5VYJ5 2156 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 UMODP07911 640 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 LAMTOR3Q9UHA4 124 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 H3BMM0 161 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 OR9G9P0C7N8 305 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 MIR17HGQ75NE6 70 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 RNF222A6NCQ9 220 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 C19orf48Q6RUI8 117 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 LEAP2Q969E1 77 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 CITED2Q99967 270 aaPredicted RBP10.19□□□□□ -0.78
SHANK2-203ENST00000409161 SSC4DQ8WTU2 575 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 STHQ8IWL8 128 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 C8orf46Q8TAG6 207 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 JMJD8Q96S16 334 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 CD160O95971 181 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 PCDH15Q96QU1 1955 aa10.19□□□□□ -0.78
SHANK2-203ENST00000409161 ADARB2-AS1A8MUL3 147 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms