RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 PRORYQ9H606 182 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 TMEM242Q9NWH2 141 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 RAMP3O60896 148 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 NDUFS6O75380 124 aaKnown RBP9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 TMEM200BQ69YZ2 307 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 LHFPL1Q86WI0 220 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 IGHV3OR16-8A0A075B7F1 116 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 UPK2O00526 184 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 LDLRAD4O15165 306 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 GATA2P23769 480 aaPredicted RBP9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 SUPT4H1P63272 117 aaKnown RBP9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 FAM159AQ6UWV7 190 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 MIR17HGQ75NE6 70 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 RAB37Q96AX2 223 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 TRAV9-1A0A075B6T8 112 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 A0A1B0GW64 132 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 SAPCD1Q5SSQ6 148 aa9.7□□□□□ -0.86
RAPGEF3-204ENST00000405493 PRB1P04280 392 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 ATP5G3P48201 142 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 RHOGP84095 191 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 DEFB121Q5J5C9 76 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 H7C2G1 150 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 GPX4P36969 197 aaPredicted RBP9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 HGFACQ04756 655 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 SRSF7Q16629 238 aaKnown RBP eCLIP9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 MYO7BQ6PIF6 2116 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 NBEAP1P0C6P0 100 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 UBE2E1P51965 193 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 LDLRAD2Q5SZI1 272 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 LRTM2Q8N967 370 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 SLC17A3O00476 420 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 PVRIGQ6DKI7 326 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 USMG5Q96IX5 58 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 DIDO1Q9BTC0 2240 aaKnown RBP9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 SAP30O75446 220 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 HBBP68871 147 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 ID3Q02535 119 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 NEUROG1Q92886 237 aa9.69□□□□□ -0.86
RAPGEF3-204ENST00000405493 AMBPP02760 352 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 Q8TCH9 128 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 C14orf144Q96I85 54 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 DOCK8Q8NF50 2099 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 OR4D5Q8NGN0 318 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 TMEM70Q9BUB7 260 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 FAM90A9PA6NNJ1 464 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 PEX7O00628 323 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 FAM71F2Q6NXP2 309 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 KLHDC3Q9BQ90 382 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 SPTAN1Q13813 2472 aaKnown RBP9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 PRSS8Q16651 343 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 BRD3OSQ6XYD6 125 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 OR52E5Q8NH55 327 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 LAMTOR2Q9Y2Q5 125 aa9.68□□□□□ -0.86
RAPGEF3-204ENST00000405493 IGKV1D-8A0A087WSZ0 117 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 C7orf71A4D174 169 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 SERF1AO75920 110 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 ARTNQ5T4W7 220 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 TCF24Q7RTU0 167 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 RPRMLQ8N4K4 120 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 OR10AG1Q8NH19 301 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 PEF1Q9UBV8 284 aaKnown RBP9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 PCNX2A6NKB5 2137 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 WT1P19544 449 aaPredicted RBP9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 GATA4P43694 442 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 ZNF324BQ6AW86 544 aaPredicted RBP9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 TMEM167AQ8TBQ9 72 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 PMCHL2Q9BQD1 86 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 TRBV20OR9-2A0A075B6H5 130 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 DAZAP2Q15038 168 aaPredicted RBP9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 SPSB3Q6PJ21 355 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 SMIM12Q96EX1 92 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 GAFA1Q96PS6 74 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 CLDN16Q9Y5I7 305 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 MUC21A0A0G2JKD1 596 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 MUC21A0A140T8X8 626 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 CD24P25063 80 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 MUC21Q5SSG8 566 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 ARL6IP6Q8N6S5 226 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 MBD3L1Q8WWY6 194 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 SLC50A1Q9BRV3 221 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 IGHV1-69DA0A0B4J2H0 117 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 C9JCJ5 164 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 IGHV1-69P01742 117 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 FMC1Q96HJ9 113 aa9.67□□□□□ -0.86
RAPGEF3-204ENST00000405493 C15orf61A6NNL5 157 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 BEND2Q8NDZ0 799 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 DMRTA2Q96SC8 542 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 PROK2Q9HC23 129 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 F11RQ9Y624 299 aaKnown RBP9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 IGHV1-3A0A0C4DH29 117 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 H7C1H1 209 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 PAX1P15863 534 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 LGALS3P17931 250 aaKnown RBP9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 C11orf44Q8N8P7 122 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 IGKV1-12A0A0C4DH73 117 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 IGKV1D-12P01611 117 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 C2orf88Q9BSF0 95 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 IGHV2-70DA0A0C4DH43 119 aa9.66□□□□□ -0.86
RAPGEF3-204ENST00000405493 IGKV3OR2-268A0A0C4DH90 116 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms