RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 TREML4Q6UXN2 200 aa9.49□□□□□ -0.89
LINC00339-201ENST00000404210 C8orf86Q6ZUL3 223 aa9.49□□□□□ -0.89
LINC00339-201ENST00000404210 THAP8Q8NA92 274 aa9.49□□□□□ -0.89
LINC00339-201ENST00000404210 UBAC2Q8NBM4 344 aa9.49□□□□□ -0.89
LINC00339-201ENST00000404210 OR11H1Q8NG94 326 aa9.49□□□□□ -0.89
LINC00339-201ENST00000404210 OR1N2Q8NGR9 330 aa9.49□□□□□ -0.89
LINC00339-201ENST00000404210 DPF1Q92782 380 aa9.49□□□□□ -0.89
LINC00339-201ENST00000404210 ACY3Q96HD9 319 aa9.49□□□□□ -0.89
LINC00339-201ENST00000404210 TMEM147Q9BVK8 224 aa9.49□□□□□ -0.89
LINC00339-201ENST00000404210 UQCC1Q9NVA1 299 aa9.49□□□□□ -0.89
LINC00339-201ENST00000404210 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 IGHV4OR15-8A0A075B7B6 117 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 A0A087WW49 117 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 SMCO3A2RU48 225 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 LINC01619G3V211 115 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 BMPR1BO00238 502 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 TAAR5O14804 337 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 TRBV12-3P01733 135 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 IGLC1P0CG04 106 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 OR10J1P30954 320 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 ADMP35318 185 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 MYCNOSP40205 109 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 AP2S1P53680 142 aaPredicted RBP9.48□□□□□ -0.89
LINC00339-201ENST00000404210 YPEL3P61236 119 aaPredicted RBP9.48□□□□□ -0.89
LINC00339-201ENST00000404210 AKR1C1Q04828 323 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 ZFP69Q49AA0 526 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 TEPPQ6URK8 271 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 GPHB5Q86YW7 130 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 KCNRGQ8N5I3 272 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 TRGV9Q99603 122 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 ATP5SQ99766 215 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 CHRDL1Q9BU40 450 aa9.48□□□□□ -0.89
LINC00339-201ENST00000404210 PPP5D1E7EU14 171 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 CCL24O00175 119 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 IGKV1-17P01599 117 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 CXCL2P19875 107 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 ZP3P21754 424 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 EIF2B2P49770 351 aaKnown RBP9.47□□□□□ -0.89
LINC00339-201ENST00000404210 RELQ04864 619 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-201ENST00000404210 ZNF616Q08AN1 781 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 CLINT1Q14677 625 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 LGALSLQ3ZCW2 172 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-201ENST00000404210 TIGITQ495A1 244 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 OR4F17Q8NGA8 305 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 RAX2Q96IS3 184 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 OR4F4Q96R69 305 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-201ENST00000404210 SMIM3Q9BZL3 60 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 WFDC1Q9HC57 220 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 FBXL17Q9UF56 701 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 WDR83OSQ9Y284 106 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 LSM4Q9Y4Z0 139 aaKnown RBP9.47□□□□□ -0.89
LINC00339-201ENST00000404210 FBN1P35555 2871 aaKnown RBP9.47□□□□□ -0.89
LINC00339-201ENST00000404210 ATRQ13535 2644 aa9.47□□□□□ -0.89
LINC00339-201ENST00000404210 IGKV1OR2-108A0A075B7D4 117 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 ZFP92A6NM28 416 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 MPDU1O75352 247 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 OR2C1O95371 312 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 IFNA5P01569 189 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 FABP1P07148 127 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 RAB31Q13636 194 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 FHL3Q13643 280 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 RPEL1Q2QD12 228 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 DEFB136Q30KP8 78 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 FAM106AQ4KMX7 169 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 BTNL8Q6UX41 500 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 ZNF600Q6ZNG1 722 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 Q8WTZ3 238 aa9.46□□□□□ -0.9
LINC00339-201ENST00000404210 WDR61Q9GZS3 305 aaKnown RBP9.46□□□□□ -0.9
LINC00339-201ENST00000404210 NDUFA4O00483 81 aa9.45□□□□□ -0.9
LINC00339-201ENST00000404210 TOMM40O96008 361 aa9.45□□□□□ -0.9
LINC00339-201ENST00000404210 CFDP00746 253 aaPredicted RBP9.45□□□□□ -0.9
LINC00339-201ENST00000404210 HOXD3P31249 432 aaPredicted RBP9.45□□□□□ -0.9
LINC00339-201ENST00000404210 SELENOTP62341 195 aa9.45□□□□□ -0.9
LINC00339-201ENST00000404210 KLF5Q13887 457 aaPredicted RBP9.45□□□□□ -0.9
LINC00339-201ENST00000404210 ZNF266Q14584 549 aa9.45□□□□□ -0.9
LINC00339-201ENST00000404210 CYP2G1PQ6ZSU1 146 aa9.45□□□□□ -0.9
LINC00339-201ENST00000404210 TMUB2Q71RG4 321 aa9.45□□□□□ -0.9
LINC00339-201ENST00000404210 SCGB1C1Q8TD33 95 aa9.45□□□□□ -0.9
LINC00339-201ENST00000404210 ARPC5LQ9BPX5 153 aa9.45□□□□□ -0.9
LINC00339-201ENST00000404210 BORCS7-ASMTA0A0B4J1R7 106 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 UBE2L5PA0A1B0GUS4 154 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 M0QZ24 198 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 LGALS9O00182 355 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 AGPAT2O15120 278 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 JTBO76095 146 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 RD3LP0DJH9 198 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 PSG1P11464 419 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 FGF7P21781 194 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 CAMLGP49069 296 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 ZNF90Q03938 601 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 PPP1R14BQ96C90 147 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 ZNF414Q96IQ9 312 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 DUX3Q96PT4 197 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 MGST2Q99735 147 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 ARL6Q9H0F7 186 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 CYTL1Q9NRR1 136 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 SLC45A2Q9UMX9 530 aa9.44□□□□□ -0.9
LINC00339-201ENST00000404210 KANTRA0A1W2PQU2 76 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms