RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 DUSP18Q8NEJ0 188 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 TMEM170AQ8WVE7 144 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 ST8SIA2Q92186 375 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 IL22RA2Q969J5 263 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 GALNT14Q96FL9 552 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 OR10C1Q96KK4 312 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 SCGB3A2Q96PL1 93 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 TXN2Q99757 166 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 SPAG8Q99932 426 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 SRRQ9GZT4 340 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 EDA2RQ9HAV5 297 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 KCNIP3Q9Y2W7 256 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 PUS1Q9Y606 427 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 TRAV14DV4A0A0A6YYC5 116 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 A0A0B4J2A0 478 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 OR4C46A6NHA9 309 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 ZNF701M0R085 212 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 CORTO00230 105 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 CLN5O75503 358 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 IGKV1-17P01599 117 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 LYL1P12980 280 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 RPL35AP18077 110 aaKnown RBP4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 NPY1RP25929 384 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 FAUP35544 74 aaKnown RBP4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 HTR2BP41595 481 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 CCR6P51684 374 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 RND2P52198 227 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 AP3S2P59780 193 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 TNFRSF9Q07011 255 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 PPP1R1AQ13522 171 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 SMCO1Q147U7 214 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 BAK1Q16611 211 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 ANKRD55Q3KP44 614 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 SPANXN2Q5MJ10 180 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 CASC10Q5T4H9 136 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 LAMTOR1Q6IAA8 161 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 PRSS54Q6PEW0 395 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 ZNF600Q6ZNG1 722 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 TCF24Q7RTU0 167 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 APRG1Q8IVJ8 170 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 LGI3Q8N145 548 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 SLC24A4Q8NFF2 622 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 OR52E5Q8NH55 327 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 SDHCQ99643 169 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 GGTLC1Q9BX51 225 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 RBKSQ9H477 322 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 SHPKQ9UHJ6 478 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 RYR2Q92736 4967 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 AGRNO00468 2067 aa4.28□□□□□ -1.72
HMGB1P20-201ENST00000402555 LOC102724200A0A096LPH7 203 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 RGS13O14921 159 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 DFFBO76075 338 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 IFNA10P01566 189 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 IGLC1P0CG04 106 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 IAPPP10997 89 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 ANXA3P12429 323 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 INPP1P49441 399 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 RBMS2Q15434 407 aaKnown RBP4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 C2orf83Q53S99 150 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 TMEM128Q5BJH2 165 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 TRIQKQ629K1 86 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 FAM90A2PQ658T7 463 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 FAM24BQ8N5W8 94 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 OR4X1Q8NH49 305 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 OR1S1Q8NH92 325 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 DTD1Q8TEA8 209 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 NPIPB3Q92617 1050 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 ACY3Q96HD9 319 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 C20orf173Q96LM9 149 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 OVOL2Q9BRP0 275 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 GINS3Q9BRX5 216 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 VSIRQ9H7M9 311 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 HSPB7Q9UBY9 170 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 FLVCR2Q9UPI3 526 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 SACSQ9NZJ4 4579 aa4.27□□□□□ -1.73
HMGB1P20-201ENST00000402555 RPS10-NUDT3A0A1W2PQS6 291 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 PITX3O75364 302 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 ADAP1O75689 374 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 SFT2D2O95562 160 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 HOXB5P09067 269 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 HOXA5P20719 270 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 NPPCP23582 126 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 OR10J1P30954 320 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 BTCP35070 178 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 RPL11P62913 178 aaKnown RBP4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 SRPXP78539 464 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 PLECQ15149 4684 aaKnown RBP4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 DEFB135Q30KP9 77 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 CENPSQ8N2Z9 138 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 STXBP6Q8NFX7 210 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 OR1S2Q8NGQ3 325 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 RNASEH2CQ8TDP1 164 aaKnown RBP4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 METTL26Q96S19 204 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 SLC25A21Q9BQT8 299 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 KRTAP4-5Q9BYR2 181 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 MAGT1Q9H0U3 335 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 MS4A6AQ9H2W1 248 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 MAP6D1Q9H9H5 199 aa4.26□□□□□ -1.73
HMGB1P20-201ENST00000402555 RABAC1Q9UI14 185 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms